RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	HXT16	P47185	567 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	STR3	P53101	465 aa	Known RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	YGL114W	P53134	725 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	TRM12	Q04235	462 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	SDH7	Q04401	133 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	ADH6	Q04894	360 aa	Known RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	ANT1	Q06497	328 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	PRP11	Q07350	266 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	GUD1	Q07729	489 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	FRE8	Q12209	686 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	EAF3	Q12432	401 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	AIM45	Q12480	344 aa	Known RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	MRPL23	Q12487	163 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	RPL13A	Q12690	199 aa	Predicted RBP	4.07	□□□□□ -1.76
RIM21	YNL294C	MOT1	P32333	1867 aa		4.07	□□□□□ -1.76
RIM21	YNL294C	SAL1	D6W196	494 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	QCR7	P00128	127 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	AMD1	P15274	810 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	SNF5	P18480	905 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	STE50	P25344	346 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YCP4	P25349	247 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	YCR023C	P25351	611 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	PEX34	P25584	144 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YCR061W	P25639	631 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	PRP45	P28004	379 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	TMA19	P35691	167 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	PTK1	P36002	662 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	TSL1	P38427	1098 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	SRP68	P38687	599 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	HPA3	P39979	161 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	EAF5	P39995	279 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	NPP2	P39997	493 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	SHO1	P40073	367 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	LRO1	P40345	661 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YIL152W	P40455	235 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	FLX1	P40464	311 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	SEC24	P40482	926 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	SHR5	P41912	237 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YIP3	P53633	176 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	GOT1	Q03554	138 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YMR155W	Q03795	547 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YMR034C	Q05131	434 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	PIN3	Q06449	215 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	CUR1	Q06469	252 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YLR040C	Q07988	224 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YOL159C	Q08300	171 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	RGT2	Q12300	763 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	PRR2	Q12310	699 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	CTF3	Q12748	733 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	GDH1	P07262	454 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	PEP4	P07267	405 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	TIR1	P10863	254 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	NHP6B	P11633	99 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RIM21	YNL294C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RIM21	YNL294C	RPB5	P20434	215 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
RIM21	YNL294C	SEC17	P32602	292 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	SKG6	P32900	734 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	SFC1	P33303	322 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YHR127W	P38833	243 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	GCV3	P39726	170 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	BMT5	P40493	336 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	LYS12	P40495	371 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	PRM2	P40534	656 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	MOB2	P43563	287 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	IKS1	P47042	667 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	OST3	P48439	350 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	DIA3	P52290	468 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	VPS73	P53142	486 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	FMP41	P53889	259 aa	Known RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	ASI3	P53983	676 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	OAZ1	Q02803	292 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	MRPL1	Q04599	285 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	DPP1	Q05521	289 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YLR456W	Q06199	204 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	ATG33	Q06485	197 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	GPI11	Q06636	219 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	CSI2	Q08054	341 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	IRC10	Q08118	586 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	TCO89	Q08921	799 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	YTM1	Q12024	460 aa	Predicted RBP	4.06	□□□□□ -1.76
RIM21	YNL294C	TMS1	Q12116	473 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	UPC2	Q12151	913 aa		4.06	□□□□□ -1.76
RIM21	YNL294C	FKS3	Q04952	1785 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	MSW1	P04803	379 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	RPL1A	P0CX43	217 aa	Known RBP	4.05	□□□□□ -1.76
RIM21	YNL294C	RPL1B	P0CX44	217 aa	Known RBP	4.05	□□□□□ -1.76
RIM21	YNL294C	PUP3	P25451	205 aa	Known RBP	4.05	□□□□□ -1.76
RIM21	YNL294C	ERG3	P32353	365 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	PMU1	P36069	295 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	DAD2	P36162	133 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	MRPL24	P36525	258 aa	Predicted RBP	4.05	□□□□□ -1.76
RIM21	YNL294C	LSM2	P38203	95 aa	Known RBP	4.05	□□□□□ -1.76
RIM21	YNL294C	YEA6	P39953	335 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	PRE6	P40303	254 aa	Known RBP	4.05	□□□□□ -1.76
RIM21	YNL294C	PAU15	P40585	124 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	ATG18	P43601	500 aa		4.05	□□□□□ -1.76
RIM21	YNL294C	ALK1	P43633	760 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms