RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W YGL159WP53110 370 aa2.83□□□□□ -1.96
SSU72YNL222W CWC27Q02770 301 aa2.83□□□□□ -1.96
SSU72YNL222W YLR053CQ12026 108 aa2.83□□□□□ -1.96
SSU72YNL222W YOL107WQ12239 342 aa2.83□□□□□ -1.96
SSU72YNL222W PAA1Q12447 191 aaKnown RBP2.83□□□□□ -1.96
SSU72YNL222W FSH3Q99369 266 aa2.83□□□□□ -1.96
SSU72YNL222W BUD4P47136 1447 aa2.83□□□□□ -1.96
SSU72YNL222W VPS63O13549 108 aa2.82□□□□□ -1.96
SSU72YNL222W RNR2P09938 399 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W IDH1P28834 360 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
SSU72YNL222W FAA1P30624 700 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W TFC1P32367 649 aa2.82□□□□□ -1.96
SSU72YNL222W GSP1P32835 219 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W GSP2P32836 220 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W SKG6P32900 734 aaPredicted RBP2.82□□□□□ -1.96
SSU72YNL222W RPS1AP33442 255 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W AIM29P36154 155 aa2.82□□□□□ -1.96
SSU72YNL222W ECM31P38122 312 aa2.82□□□□□ -1.96
SSU72YNL222W ECM13P38195 257 aa2.82□□□□□ -1.96
SSU72YNL222W PRS2P38620 318 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W ATG7P38862 630 aa2.82□□□□□ -1.96
SSU72YNL222W FET3P38993 636 aa2.82□□□□□ -1.96
SSU72YNL222W GVP36P40531 326 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W YKE4P40544 346 aa2.82□□□□□ -1.96
SSU72YNL222W YFR018CP43599 363 aa2.82□□□□□ -1.96
SSU72YNL222W NBP1P52919 319 aaPredicted RBP2.82□□□□□ -1.96
SSU72YNL222W PNC1P53184 216 aaKnown RBP2.82□□□□□ -1.96
SSU72YNL222W LST7P53237 242 aa2.82□□□□□ -1.96
SSU72YNL222W DID2P69771 204 aa2.82□□□□□ -1.96
SSU72YNL222W PRM15Q03262 622 aa2.82□□□□□ -1.96
SSU72YNL222W CDC123Q05791 360 aa2.82□□□□□ -1.96
SSU72YNL222W YLR283WQ05867 314 aa2.82□□□□□ -1.96
SSU72YNL222W NEJ1Q06148 342 aa2.82□□□□□ -1.96
SSU72YNL222W YPR127WQ06494 345 aa2.82□□□□□ -1.96
SSU72YNL222W UIP4Q08926 304 aa2.82□□□□□ -1.96
SSU72YNL222W DCN1Q12395 269 aa2.82□□□□□ -1.96
SSU72YNL222W SIR4P11978 1358 aa2.82□□□□□ -1.96
SSU72YNL222W SPP41P38904 1435 aa2.82□□□□□ -1.96
SSU72YNL222W MDS3P53094 1487 aa2.82□□□□□ -1.96
SSU72YNL222W TDH2P00358 332 aaKnown RBP2.81□□□□□ -1.96
SSU72YNL222W TDH3P00359 332 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
SSU72YNL222W ATP6P00854 259 aa2.81□□□□□ -1.96
SSU72YNL222W MSF1P08425 469 aa2.81□□□□□ -1.96
SSU72YNL222W NHP6AP11632 93 aaKnown RBP2.81□□□□□ -1.96
SSU72YNL222W COQ1P18900 473 aa2.81□□□□□ -1.96
SSU72YNL222W CNB1P25296 175 aa2.81□□□□□ -1.96
SSU72YNL222W DCC1P25559 380 aa2.81□□□□□ -1.96
SSU72YNL222W ATG22P25568 528 aa2.81□□□□□ -1.96
SSU72YNL222W PBN1P25580 416 aa2.81□□□□□ -1.96
SSU72YNL222W RPS5P26783 225 aaKnown RBP2.81□□□□□ -1.96
SSU72YNL222W PTK1P36002 662 aaPredicted RBP2.81□□□□□ -1.96
SSU72YNL222W NVJ1P38881 321 aa2.81□□□□□ -1.96
SSU72YNL222W RMD6P39975 231 aa2.81□□□□□ -1.96
SSU72YNL222W YGR201CP42936 225 aa2.81□□□□□ -1.96
SSU72YNL222W YAR1P46683 200 aa2.81□□□□□ -1.96
SSU72YNL222W YGL185CP53100 379 aa2.81□□□□□ -1.96
SSU72YNL222W YPL080CQ02826 108 aa2.81□□□□□ -1.96
SSU72YNL222W YDR476CQ03362 224 aa2.81□□□□□ -1.96
SSU72YNL222W SMP3Q04174 516 aa2.81□□□□□ -1.96
SSU72YNL222W CSM3Q04659 317 aa2.81□□□□□ -1.96
SSU72YNL222W CDD1Q06549 142 aa2.81□□□□□ -1.96
SSU72YNL222W LDB18Q07887 179 aa2.81□□□□□ -1.96
SSU72YNL222W EMP46Q12396 444 aa2.81□□□□□ -1.96
SSU72YNL222W ATG31Q12421 196 aa2.81□□□□□ -1.96
SSU72YNL222W AIM45Q12480 344 aaKnown RBP2.81□□□□□ -1.96
SSU72YNL222W AGC1Q12482 902 aa2.81□□□□□ -1.96
SSU72YNL222W MMS22Q06164 1454 aa2.81□□□□□ -1.96
SSU72YNL222W PEP1P32319 1579 aa2.8□□□□□ -1.96
SSU72YNL222W HAP1P0CE41 1502 aa2.8□□□□□ -1.96
SSU72YNL222W REV3P14284 1504 aa2.8□□□□□ -1.96
SSU72YNL222W SIN3P22579 1536 aa2.8□□□□□ -1.96
SSU72YNL222W IQG1Q12280 1495 aa2.8□□□□□ -1.96
SSU72YNL222W ADE6P38972 1358 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W YOR304C-AO14468 76 aa2.8□□□□□ -1.96
SSU72YNL222W SPT3P06844 337 aa2.8□□□□□ -1.96
SSU72YNL222W QCR2P07257 368 aa2.8□□□□□ -1.96
SSU72YNL222W CDC33P07260 213 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W RPL27AP0C2H6 136 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W RPL27BP0C2H7 136 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W MAS1P10507 462 aa2.8□□□□□ -1.96
SSU72YNL222W FRS2P15625 503 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W MET16P18408 261 aaPredicted RBP2.8□□□□□ -1.96
SSU72YNL222W UBC8P28263 218 aa2.8□□□□□ -1.96
SSU72YNL222W RAD23P32628 398 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W LHP1P33399 275 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W TIP20P33891 701 aa2.8□□□□□ -1.96
SSU72YNL222W BDH1P39714 382 aa2.8□□□□□ -1.96
SSU72YNL222W GDS1P41913 522 aa2.8□□□□□ -1.96
SSU72YNL222W FMP33P46998 180 aa2.8□□□□□ -1.96
SSU72YNL222W YJL016WP47072 561 aa2.8□□□□□ -1.96
SSU72YNL222W YIP3P53633 176 aa2.8□□□□□ -1.96
SSU72YNL222W YNL143CP53908 130 aa2.8□□□□□ -1.96
SSU72YNL222W YNL140CP53910 189 aa2.8□□□□□ -1.96
SSU72YNL222W AQR1P53943 586 aa2.8□□□□□ -1.96
SSU72YNL222W RPL6AQ02326 176 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W ARL3Q02804 198 aa2.8□□□□□ -1.96
SSU72YNL222W YMR279CQ03263 540 aa2.8□□□□□ -1.96
SSU72YNL222W YMR226CQ05016 267 aaKnown RBP2.8□□□□□ -1.96
SSU72YNL222W STE23Q06010 1027 aa2.8□□□□□ -1.96
SSU72YNL222W ZEO1Q08245 113 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 103.9 ms