RNA–Protein interactions for RNA: YLR325C

RPL38, Transcript of Ribosomal 60S subunit protein L38, yeastyeast

Gene RPL38, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL38YLR325C CHD1P32657 1468 aa0.66□□□□□ -2.3
RPL38YLR325C STF1P01098 86 aa0.65□□□□□ -2.31
RPL38YLR325C RPC40P07703 335 aaKnown RBP0.65□□□□□ -2.31
RPL38YLR325C COS2P0CX12 379 aa0.65□□□□□ -2.31
RPL38YLR325C COS3P0CX13 379 aa0.65□□□□□ -2.31
RPL38YLR325C PPH21P23594 369 aa0.65□□□□□ -2.31
RPL38YLR325C EBP2P36049 427 aaKnown RBP0.65□□□□□ -2.31
RPL38YLR325C YHL049CP38722 271 aa0.65□□□□□ -2.31
RPL38YLR325C AGX1P43567 385 aa0.65□□□□□ -2.31
RPL38YLR325C EMI1Q04406 187 aa0.65□□□□□ -2.31
RPL38YLR325C RRG8Q06109 277 aa0.65□□□□□ -2.31
RPL38YLR325C YPR011CQ12251 326 aa0.65□□□□□ -2.31
RPL38YLR325C SAC3P46674 1301 aa0.64□□□□□ -2.31
RPL38YLR325C RAD3P06839 778 aa0.64□□□□□ -2.31
RPL38YLR325C SGA1P08019 549 aa0.64□□□□□ -2.31
RPL38YLR325C GCD2P12754 651 aaPredicted RBP0.64□□□□□ -2.31
RPL38YLR325C VMA2P16140 517 aaKnown RBP0.64□□□□□ -2.31
RPL38YLR325C YSR3P23501 404 aa0.64□□□□□ -2.31
RPL38YLR325C RIB7P33312 244 aa0.64□□□□□ -2.31
RPL38YLR325C HEK2P38199 381 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
RPL38YLR325C RRF1P38771 230 aa0.64□□□□□ -2.31
RPL38YLR325C RTT105P40063 208 aa0.64□□□□□ -2.31
RPL38YLR325C PNC1P53184 216 aaKnown RBP0.64□□□□□ -2.31
RPL38YLR325C PRO2P54885 456 aaKnown RBP0.64□□□□□ -2.31
RPL38YLR325C TIM11P81449 96 aaPredicted RBP0.64□□□□□ -2.31
RPL38YLR325C CDC14Q00684 551 aa0.64□□□□□ -2.31
RPL38YLR325C LAP3Q01532 483 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
RPL38YLR325C PRM15Q03262 622 aa0.64□□□□□ -2.31
RPL38YLR325C ATC1Q04005 294 aa0.64□□□□□ -2.31
RPL38YLR325C VBA1Q04301 562 aa0.64□□□□□ -2.31
RPL38YLR325C REX3Q12090 404 aa0.64□□□□□ -2.31
RPL38YLR325C RAS2P01120 322 aaKnown RBP0.63□□□□□ -2.31
RPL38YLR325C YHR032W-AP0C5N6 59 aa0.63□□□□□ -2.31
RPL38YLR325C YOL162WP0CF19 215 aa0.63□□□□□ -2.31
RPL38YLR325C UGA1P17649 471 aa0.63□□□□□ -2.31
RPL38YLR325C POF1P25576 258 aa0.63□□□□□ -2.31
RPL38YLR325C DAL80P26343 269 aa0.63□□□□□ -2.31
RPL38YLR325C CWP1P28319 239 aa0.63□□□□□ -2.31
RPL38YLR325C TIM21P53220 239 aa0.63□□□□□ -2.31
RPL38YLR325C SLX9P53251 210 aaPredicted RBP0.63□□□□□ -2.31
RPL38YLR325C GRX3Q03835 250 aa0.63□□□□□ -2.31
RPL38YLR325C RNH1Q04740 348 aa0.63□□□□□ -2.31
RPL38YLR325C YPR172WQ06608 200 aa0.63□□□□□ -2.31
RPL38YLR325C MDY2Q12285 212 aa0.63□□□□□ -2.31
RPL38YLR325C ATO3Q12359 275 aa0.63□□□□□ -2.31
RPL38YLR325C RRP36Q12481 300 aaPredicted RBP0.63□□□□□ -2.31
RPL38YLR325C AI5_BETAQ9ZZX0 354 aa0.63□□□□□ -2.31
RPL38YLR325C QCR6P00127 147 aa0.62□□□□□ -2.31
RPL38YLR325C CDC7P06243 507 aa0.62□□□□□ -2.31
RPL38YLR325C RAD51P25454 400 aa0.62□□□□□ -2.31
RPL38YLR325C PEX3P28795 441 aa0.62□□□□□ -2.31
RPL38YLR325C MRPL40P36534 297 aa0.62□□□□□ -2.31
RPL38YLR325C VPS45P38932 577 aa0.62□□□□□ -2.31
RPL38YLR325C PEP8P40335 379 aa0.62□□□□□ -2.31
RPL38YLR325C OST2P46964 130 aa0.62□□□□□ -2.31
RPL38YLR325C NUP84P52891 726 aa0.62□□□□□ -2.31
RPL38YLR325C NBP35P52920 328 aa0.62□□□□□ -2.31
RPL38YLR325C YGL185CP53100 379 aa0.62□□□□□ -2.31
RPL38YLR325C ARP5P53946 755 aa0.62□□□□□ -2.31
RPL38YLR325C YNL050CP53952 270 aa0.62□□□□□ -2.31
RPL38YLR325C ERV25P54837 211 aaKnown RBP0.62□□□□□ -2.31
RPL38YLR325C CWC21Q03375 135 aaKnown RBP0.62□□□□□ -2.31
RPL38YLR325C PEX10Q05568 337 aa0.62□□□□□ -2.31
RPL38YLR325C YLR179CQ06252 201 aaKnown RBP0.62□□□□□ -2.31
RPL38YLR325C ARV1Q06541 321 aa0.62□□□□□ -2.31
RPL38YLR325C YOS9Q99220 542 aa0.62□□□□□ -2.31
RPL38YLR325C RPP0P05317 312 aaKnown RBP0.61□□□□□ -2.31
RPL38YLR325C MER1P16523 270 aa0.61□□□□□ -2.31
RPL38YLR325C OM45P16547 393 aa0.61□□□□□ -2.31
RPL38YLR325C DBP3P20447 523 aaKnown RBP0.61□□□□□ -2.31
RPL38YLR325C NTG1P31378 399 aa0.61□□□□□ -2.31
RPL38YLR325C YUH1P35127 236 aa0.61□□□□□ -2.31
RPL38YLR325C RCN1P36054 211 aa0.61□□□□□ -2.31
RPL38YLR325C YKR045CP36138 183 aa0.61□□□□□ -2.31
RPL38YLR325C DRE2P36152 348 aa0.61□□□□□ -2.31
RPL38YLR325C HSM3P38348 480 aa0.61□□□□□ -2.31
RPL38YLR325C BFR1P38934 470 aaKnown RBP RIP-Chip data0.61□□□□□ -2.31not detected
RPL38YLR325C PRM9P39551 298 aa0.61□□□□□ -2.31
RPL38YLR325C YHB1P39676 399 aaKnown RBP0.61□□□□□ -2.31
RPL38YLR325C MPP6P53725 186 aaPredicted RBP0.61□□□□□ -2.31
RPL38YLR325C AAH1P53909 347 aa0.61□□□□□ -2.31
RPL38YLR325C RRN5Q02983 363 aa0.61□□□□□ -2.31
RPL38YLR325C RSM10Q03201 203 aa0.61□□□□□ -2.31
RPL38YLR325C MGR3Q04472 501 aa0.61□□□□□ -2.31
RPL38YLR325C CTR3Q06686 241 aa0.61□□□□□ -2.31
RPL38YLR325C RRT8Q08219 342 aa0.61□□□□□ -2.31
RPL38YLR325C RUD3Q12234 484 aaKnown RBP0.61□□□□□ -2.31
RPL38YLR325C BBP1Q12365 385 aa0.61□□□□□ -2.31
RPL38YLR325C YBL008W-AQ3E821 79 aa0.61□□□□□ -2.31
RPL38YLR325C POX1P13711 748 aa0.6□□□□□ -2.31
RPL38YLR325C RPB4P20433 221 aaPredicted RBP0.6□□□□□ -2.31
RPL38YLR325C CCA1P21269 546 aa0.6□□□□□ -2.31
RPL38YLR325C MRPL25P23369 157 aa0.6□□□□□ -2.31
RPL38YLR325C VPS3P23643 1011 aa0.6□□□□□ -2.31
RPL38YLR325C VMA11P32842 164 aa0.6□□□□□ -2.31
RPL38YLR325C SKI2P35207 1287 aaKnown RBP RIP-Chip data0.6□□□□□ -2.31not detected
RPL38YLR325C YKT6P36015 200 aaKnown RBP0.6□□□□□ -2.31
RPL38YLR325C MRPL37P36532 105 aa0.6□□□□□ -2.31
RPL38YLR325C ECM13P38195 257 aa0.6□□□□□ -2.31
RPL38YLR325C YER034WP40022 185 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms