RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W PET494P07390 489 aaPredicted RBP3.72□□□□□ -1.81
SOF1YLL011W CPR1P14832 162 aaKnown RBP3.72□□□□□ -1.81
SOF1YLL011W MIR1P23641 311 aaKnown RBP3.72□□□□□ -1.81
SOF1YLL011W ILV6P25605 309 aaKnown RBP3.72□□□□□ -1.81
SOF1YLL011W SSO1P32867 290 aa3.72□□□□□ -1.81
SOF1YLL011W YBR062CP38239 180 aa3.72□□□□□ -1.81
SOF1YLL011W TRM5P38793 499 aa3.72□□□□□ -1.81
SOF1YLL011W HEM14P40012 539 aa3.72□□□□□ -1.81
SOF1YLL011W SCS3P53012 380 aa3.72□□□□□ -1.81
SOF1YLL011W YNL247WP53852 767 aaKnown RBP3.72□□□□□ -1.81
SOF1YLL011W YMR114CQ04471 368 aaKnown RBP3.72□□□□□ -1.81
SOF1YLL011W PEX10Q05568 337 aa3.72□□□□□ -1.81
SOF1YLL011W HCR1Q05775 265 aaKnown RBP3.72□□□□□ -1.81
SOF1YLL011W ATG17Q06410 417 aa3.72□□□□□ -1.81
SOF1YLL011W TUS1Q06412 1307 aa3.71□□□□□ -1.82
SOF1YLL011W RPL15AP05748 204 aaKnown RBP3.71□□□□□ -1.82
SOF1YLL011W MRPL20P22354 195 aaPredicted RBP3.71□□□□□ -1.82
SOF1YLL011W CMK2P22517 447 aa3.71□□□□□ -1.82
SOF1YLL011W NTF2P33331 125 aaKnown RBP3.71□□□□□ -1.82
SOF1YLL011W SUR2P38992 349 aa3.71□□□□□ -1.82
SOF1YLL011W HAC1P41546 238 aa3.71□□□□□ -1.82
SOF1YLL011W AIM23P47015 356 aa3.71□□□□□ -1.82
SOF1YLL011W MIC26P50087 233 aa3.71□□□□□ -1.82
SOF1YLL011W YGR067CP53243 804 aa3.71□□□□□ -1.82
SOF1YLL011W TPC1P53257 314 aa3.71□□□□□ -1.82
SOF1YLL011W VAC7P53950 1165 aa3.71□□□□□ -1.82
SOF1YLL011W TAF9Q05027 157 aa3.71□□□□□ -1.82
SOF1YLL011W YHC1Q05900 231 aaKnown RBP3.71□□□□□ -1.82
SOF1YLL011W YPR098CQ06089 161 aa3.71□□□□□ -1.82
SOF1YLL011W DTD1Q07648 150 aaKnown RBP3.71□□□□□ -1.82
SOF1YLL011W MFG1Q07684 458 aa3.71□□□□□ -1.82
SOF1YLL011W TLG2Q08144 397 aa3.71□□□□□ -1.82
SOF1YLL011W RRS1Q08746 203 aaKnown RBP3.71□□□□□ -1.82
SOF1YLL011W ICT1Q12385 394 aa3.71□□□□□ -1.82
SOF1YLL011W DCN1Q12395 269 aa3.71□□□□□ -1.82
SOF1YLL011W LYS2P07702 1392 aa3.7□□□□□ -1.82
SOF1YLL011W EHD3P28817 500 aa3.7□□□□□ -1.82
SOF1YLL011W RCK1P38622 512 aa3.7□□□□□ -1.82
SOF1YLL011W MTW1P39731 289 aa3.7□□□□□ -1.82
SOF1YLL011W FRT2P39734 528 aa3.7□□□□□ -1.82
SOF1YLL011W PRE6P40303 254 aaKnown RBP3.7□□□□□ -1.82
SOF1YLL011W BMT5P40493 336 aa3.7□□□□□ -1.82
SOF1YLL011W SER33P40510 469 aa3.7□□□□□ -1.82
SOF1YLL011W PSA1P41940 361 aaKnown RBP3.7□□□□□ -1.82
SOF1YLL011W SHY1P53266 389 aa3.7□□□□□ -1.82
SOF1YLL011W SWS2P53937 143 aa3.7□□□□□ -1.82
SOF1YLL011W RHO3Q00245 231 aaKnown RBP3.7□□□□□ -1.82
SOF1YLL011W GAS2Q06135 555 aa3.7□□□□□ -1.82
SOF1YLL011W SEC10Q06245 871 aa3.7□□□□□ -1.82
SOF1YLL011W ESA1Q08649 445 aa3.7□□□□□ -1.82
SOF1YLL011W FAS2P19097 1887 aaKnown RBP3.69□□□□□ -1.82
SOF1YLL011W TPI1P00942 248 aaKnown RBP3.69□□□□□ -1.82
SOF1YLL011W ACP1P32463 125 aa3.69□□□□□ -1.82
SOF1YLL011W CHL4P38907 458 aa3.69□□□□□ -1.82
SOF1YLL011W RPH1P39956 796 aa3.69□□□□□ -1.82
SOF1YLL011W YFL067WP43537 175 aa3.69□□□□□ -1.82
SOF1YLL011W YFR057WP43625 151 aa3.69□□□□□ -1.82
SOF1YLL011W TRM9P49957 279 aa3.69□□□□□ -1.82
SOF1YLL011W NBP35P52920 328 aa3.69□□□□□ -1.82
SOF1YLL011W YIP3P53633 176 aa3.69□□□□□ -1.82
SOF1YLL011W NRM1P53718 249 aa3.69□□□□□ -1.82
SOF1YLL011W RTC4P53850 401 aa3.69□□□□□ -1.82
SOF1YLL011W SCS7Q03529 384 aa3.69□□□□□ -1.82
SOF1YLL011W FMP42Q04991 504 aa3.69□□□□□ -1.82
SOF1YLL011W ERP1Q05359 219 aaKnown RBP3.69□□□□□ -1.82
SOF1YLL011W HEM25Q07534 307 aa3.69□□□□□ -1.82
SOF1YLL011W YDL144CQ07589 356 aa3.69□□□□□ -1.82
SOF1YLL011W ATP16Q12165 160 aa3.69□□□□□ -1.82
SOF1YLL011W YLR126CQ12288 251 aa3.69□□□□□ -1.82
SOF1YLL011W BI3Q9ZZW7 517 aa3.69□□□□□ -1.82
SOF1YLL011W CBS2P14905 389 aa3.68□□□□□ -1.82
SOF1YLL011W TPS2P31688 896 aaKnown RBP3.68□□□□□ -1.82
SOF1YLL011W ANR2P36090 516 aaPredicted RBP3.68□□□□□ -1.82
SOF1YLL011W VAB2P40003 282 aa3.68□□□□□ -1.82
SOF1YLL011W YIL152WP40455 235 aa3.68□□□□□ -1.82
SOF1YLL011W POG1P40473 351 aa3.68□□□□□ -1.82
SOF1YLL011W PRM5P40476 318 aa3.68□□□□□ -1.82
SOF1YLL011W XBP1P40489 647 aa3.68□□□□□ -1.82
SOF1YLL011W YJR085CP47131 105 aaKnown RBP3.68□□□□□ -1.82
SOF1YLL011W VPS60Q03390 229 aa3.68□□□□□ -1.82
SOF1YLL011W YMR166CQ03829 368 aa3.68□□□□□ -1.82
SOF1YLL011W FSH2Q05015 223 aa3.68□□□□□ -1.82
SOF1YLL011W FAR10Q06001 478 aa3.68□□□□□ -1.82
SOF1YLL011W SNA4Q07549 140 aa3.68□□□□□ -1.82
SOF1YLL011W HMS1Q12398 434 aa3.68□□□□□ -1.82
SOF1YLL011W FOL3Q12676 427 aaPredicted RBP3.68□□□□□ -1.82
SOF1YLL011W YAL064W-BO13512 126 aa3.67□□□□□ -1.82
SOF1YLL011W STE7P06784 515 aa3.67□□□□□ -1.82
SOF1YLL011W PPH21P23594 369 aa3.67□□□□□ -1.82
SOF1YLL011W URA10P30402 227 aa3.67□□□□□ -1.82
SOF1YLL011W ALK2P32789 676 aaPredicted RBP3.67□□□□□ -1.82
SOF1YLL011W PEX2P32800 271 aa3.67□□□□□ -1.82
SOF1YLL011W UBC6P33296 250 aaPredicted RBP3.67□□□□□ -1.82
SOF1YLL011W FZO1P38297 855 aa3.67□□□□□ -1.82
SOF1YLL011W ARC40P38328 384 aaKnown RBP3.67□□□□□ -1.82
SOF1YLL011W GOS1P38736 223 aa3.67□□□□□ -1.82
SOF1YLL011W WSC4P38739 605 aa3.67□□□□□ -1.82
SOF1YLL011W NUP57P48837 541 aa3.67□□□□□ -1.82
SOF1YLL011W SSU72P53538 206 aaPredicted RBP3.67□□□□□ -1.82
SOF1YLL011W PRP38Q00723 242 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms