RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	RRP9	Q06506	573 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	MMT2	Q08970	484 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	ATG5	Q12380	294 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	UTP20	P35194	2493 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	ACC1	Q00955	2233 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	TOR2	P32600	2474 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	POX1	P13711	748 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	THR4	P16120	514 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	COQ1	P18900	473 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	UTR1	P21373	530 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	PHA2	P32452	334 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	MRPS9	P38120	278 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	QDR3	P38227	689 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	VMA22	P38784	181 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	MNN9	P39107	395 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	SIM1	P40472	476 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	UTP25	P40498	721 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	HSH155	P49955	971 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	YNR066C	P53752	436 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	TLG1	Q03322	224 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	ENT5	Q03769	411 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	TAF11	Q04226	346 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	ATG17	Q06410	417 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	CMS1	Q07897	291 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	GPM2	Q12008	311 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	REX3	Q12090	404 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	TPO4	Q12256	659 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	ATG34	Q12292	412 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	YOP1	Q12402	180 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	MHT1	Q12525	324 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	ADH1	P00330	348 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	YPR170W-B	P0C5R9	85 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	ALG1	P16661	449 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	TIR2	P33890	251 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	STP2	P38704	541 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	YER186C	P40101	306 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	YRB2	P40517	327 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	PXR1	P53335	271 aa	Predicted RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	SWT21	P53873	357 aa	Predicted RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	MRX11	Q03079	207 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	SNZ1	Q03148	297 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	MYO5	Q04439	1219 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	RRP40	Q08285	240 aa	Known RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	YDR262W	Q12331	272 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	IES3	Q12345	250 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	DCP1	Q12517	231 aa	Predicted RBP	0.73	□□□□□ -2.29
PRP16	YKR086W	YPL119C-A	Q3E751	87 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	YBL008W-A	Q3E821	79 aa		0.73	□□□□□ -2.29
PRP16	YKR086W	RPS19A	P07280	144 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	RPS19B	P07281	144 aa	Predicted RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	UNG1	P12887	359 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	RSR1	P13856	272 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	ECT1	P33412	323 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	SEN34	P39707	275 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	GAT2	P40209	560 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	MOB2	P43563	287 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	KEG1	P43614	200 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	LOH1	P47055	219 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	PRP24	P49960	444 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	YGL193C	P53097	103 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	PNC1	P53184	216 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	INP1	Q03694	420 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	SKI7	Q08491	747 aa	Predicted RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	VPS13	Q07878	3144 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	COX3	P00420	269 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	HAP2	P06774	265 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	FUS3	P16892	353 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	SUR1	P33300	382 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	VPS51	P36116	164 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	RCY1	P39531	840 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	GLE2	P40066	365 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	TOS2	P50078	622 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	UTP6	Q02354	440 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	TRM12	Q04235	462 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	GMC1	Q04399	608 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	FCY22	Q12119	530 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	TPT1	Q12272	230 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	MCT1	Q12283	360 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	YDR524C-B	Q3E6R4	66 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	YOL085C	Q99345	113 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	SEN1	Q00416	2231 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	YPR096C	O13587	100 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	TDH1	P00360	332 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	SCEI	P03882	235 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	ZRC1	P20107	442 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	SEC22	P22214	214 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	ZUO1	P32527	433 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	SKT5	P34226	696 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	YKR032W	P36127	104 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	SIF2	P38262	535 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	BAT1	P38891	393 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	SEC72	P39742	193 aa	Known RBP	0.72	□□□□□ -2.29
PRP16	YKR086W	IBA57	P47158	497 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	BIO3	P50277	480 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	SBH1	P52870	82 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	YGL034C	P53186	121 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	FMP48	P53233	369 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	TPC1	P53257	314 aa		0.72	□□□□□ -2.29
PRP16	YKR086W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
PRP16	YKR086W	YNL134C	P53912	376 aa	Known RBP	0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 118 ms