RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W FAR10Q06001 478 aa1.92□□□□□ -2.1
CBF2YGR140W MFG1Q07684 458 aa1.92□□□□□ -2.1
CBF2YGR140W IRC25Q07951 179 aa1.92□□□□□ -2.1
CBF2YGR140W YLR036CQ07986 203 aa1.92□□□□□ -2.1
CBF2YGR140W ERV2Q12284 196 aa1.92□□□□□ -2.1
CBF2YGR140W WTM1Q12363 437 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W YNL162W-AQ3E7A8 72 aa1.92□□□□□ -2.1
CBF2YGR140W YFL068WP0CX99 160 aa1.92□□□□□ -2.1
CBF2YGR140W YLL066W-AP0CY00 160 aa1.92□□□□□ -2.1
CBF2YGR140W YLL067W-AP0CY01 160 aa1.92□□□□□ -2.1
CBF2YGR140W CHA1P25379 360 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W EHD3P28817 500 aa1.92□□□□□ -2.1
CBF2YGR140W YPT52P36018 234 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W FIG1P38224 298 aa1.92□□□□□ -2.1
CBF2YGR140W YJR056CP47115 236 aa1.92□□□□□ -2.1
CBF2YGR140W YJR085CP47131 105 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W CRH1P53301 507 aa1.92□□□□□ -2.1
CBF2YGR140W YIP3P53633 176 aa1.92□□□□□ -2.1
CBF2YGR140W YNR066CP53752 436 aa1.92□□□□□ -2.1
CBF2YGR140W SNZ2P53824 298 aa1.92□□□□□ -2.1
CBF2YGR140W MDM32Q12171 622 aa1.92□□□□□ -2.1
CBF2YGR140W TPO4Q12256 659 aa1.92□□□□□ -2.1
CBF2YGR140W IZH2Q12442 317 aa1.92□□□□□ -2.1
CBF2YGR140W RPL21BQ12672 160 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W TPI1P00942 248 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W RPL4AP10664 362 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W NTF2P33331 125 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W FES1P38260 290 aa1.92□□□□□ -2.1
CBF2YGR140W PHO89P38361 574 aa1.92□□□□□ -2.1
CBF2YGR140W EFM1P38732 585 aa1.92□□□□□ -2.1
CBF2YGR140W CHL4P38907 458 aa1.92□□□□□ -2.1
CBF2YGR140W ERG10P41338 398 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W TMA22P47089 198 aaPredicted RBP1.92□□□□□ -2.1
CBF2YGR140W RPL4BP49626 362 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W YGR018CP53211 109 aa1.92□□□□□ -2.1
CBF2YGR140W SWS2P53937 143 aa1.92□□□□□ -2.1
CBF2YGR140W PRP38Q00723 242 aaPredicted RBP1.92□□□□□ -2.1
CBF2YGR140W SCS7Q03529 384 aa1.92□□□□□ -2.1
CBF2YGR140W PBA1Q05778 276 aa1.92□□□□□ -2.1
CBF2YGR140W YHC1Q05900 231 aaKnown RBP1.92□□□□□ -2.1
CBF2YGR140W YLR177WQ06251 628 aa1.92□□□□□ -2.1
CBF2YGR140W PPT2Q12036 173 aa1.92□□□□□ -2.1
CBF2YGR140W EMP46Q12396 444 aa1.92□□□□□ -2.1
CBF2YGR140W YCL012CQ8J0M4 134 aa1.92□□□□□ -2.1
CBF2YGR140W SAL1D6W196 494 aa1.91□□□□□ -2.1
CBF2YGR140W ASP3-2P0CX77 362 aa1.91□□□□□ -2.1
CBF2YGR140W ASP3-3P0CX78 362 aa1.91□□□□□ -2.1
CBF2YGR140W ASP3-4P0CX79 362 aa1.91□□□□□ -2.1
CBF2YGR140W ASP3-1P0CZ17 362 aa1.91□□□□□ -2.1
CBF2YGR140W GCY1P14065 312 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
CBF2YGR140W RNA14P25298 677 aaKnown RBP1.91□□□□□ -2.1
CBF2YGR140W YCR043CP25361 127 aa1.91□□□□□ -2.1
CBF2YGR140W UBC6P33296 250 aaPredicted RBP1.91□□□□□ -2.1
CBF2YGR140W YCR087C-AP37263 153 aa1.91□□□□□ -2.1
CBF2YGR140W HMT1P38074 348 aa1.91□□□□□ -2.1
CBF2YGR140W AME1P38313 324 aa1.91□□□□□ -2.1
CBF2YGR140W SSH1P38353 490 aaKnown RBP1.91□□□□□ -2.1
CBF2YGR140W GOS1P38736 223 aa1.91□□□□□ -2.1
CBF2YGR140W IRC18P47056 224 aa1.91□□□□□ -2.1
CBF2YGR140W MCM22P47167 239 aa1.91□□□□□ -2.1
CBF2YGR140W BXI1P48558 297 aa1.91□□□□□ -2.1
CBF2YGR140W YDR115WQ04598 105 aa1.91□□□□□ -2.1
CBF2YGR140W LIP2Q06005 328 aa1.91□□□□□ -2.1
CBF2YGR140W BRX1Q08235 291 aaKnown RBP1.91□□□□□ -2.1
CBF2YGR140W SPT3P06844 337 aa1.91□□□□□ -2.1
CBF2YGR140W MRS3P10566 314 aa1.91□□□□□ -2.1
CBF2YGR140W ATS1P31386 333 aa1.91□□□□□ -2.1
CBF2YGR140W CAT2P32796 670 aaKnown RBP1.91□□□□□ -2.1
CBF2YGR140W YBL059WP34224 193 aa1.91□□□□□ -2.1
CBF2YGR140W POP7P38291 140 aa1.91□□□□□ -2.1
CBF2YGR140W YAP3P38749 330 aa1.91□□□□□ -2.1
CBF2YGR140W OXA1P39952 402 aa1.91□□□□□ -2.1
CBF2YGR140W SOK1P40317 901 aa1.91□□□□□ -2.1
CBF2YGR140W SNZ3P43545 298 aa1.91□□□□□ -2.1
CBF2YGR140W ILM1P47155 203 aa1.91□□□□□ -2.1
CBF2YGR140W TPC1P53257 314 aa1.91□□□□□ -2.1
CBF2YGR140W YDR124WQ04608 324 aa1.91□□□□□ -2.1
CBF2YGR140W HNT3Q08702 217 aa1.91□□□□□ -2.1
CBF2YGR140W NDD1Q08887 554 aa1.91□□□□□ -2.1
CBF2YGR140W DBF2P22204 572 aa1.9□□□□□ -2.1
CBF2YGR140W AAT2P23542 418 aaKnown RBP1.9□□□□□ -2.1
CBF2YGR140W SEC1P30619 724 aaKnown RBP1.9□□□□□ -2.1
CBF2YGR140W YOX1P34161 385 aa1.9□□□□□ -2.1
CBF2YGR140W GPX1P36014 167 aa1.9□□□□□ -2.1
CBF2YGR140W YBR062CP38239 180 aa1.9□□□□□ -2.1
CBF2YGR140W YBR096WP38256 230 aa1.9□□□□□ -2.1
CBF2YGR140W SPL2P38839 148 aa1.9□□□□□ -2.1
CBF2YGR140W YER186CP40101 306 aa1.9□□□□□ -2.1
CBF2YGR140W AVT7P40501 490 aa1.9□□□□□ -2.1
CBF2YGR140W SER33P40510 469 aa1.9□□□□□ -2.1
CBF2YGR140W GAB1P41733 394 aa1.9□□□□□ -2.1
CBF2YGR140W SDS23P53172 527 aa1.9□□□□□ -2.1
CBF2YGR140W YLR460CP54007 376 aa1.9□□□□□ -2.1
CBF2YGR140W HRI1Q05905 244 aaKnown RBP1.9□□□□□ -2.1
CBF2YGR140W GRX8Q05926 109 aa1.9□□□□□ -2.1
CBF2YGR140W SEI1Q06058 285 aa1.9□□□□□ -2.1
CBF2YGR140W SRP102P36057 244 aaPredicted RBP1.9□□□□□ -2.11
CBF2YGR140W ATG18P43601 500 aa1.9□□□□□ -2.11
CBF2YGR140W LSM1P47017 172 aaKnown RBP1.9□□□□□ -2.11
CBF2YGR140W SBH2P52871 88 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms