RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W ATG41Q12048 136 aa3□□□□□ -1.93
USE1YGL098W PER33Q12144 273 aa3□□□□□ -1.93
USE1YGL098W YCT1Q12235 531 aa3□□□□□ -1.93
USE1YGL098W SNF8Q12483 233 aa3□□□□□ -1.93
USE1YGL098W YKL018C-AQ3E7A7 99 aa3□□□□□ -1.93
USE1YGL098W Q0010Q9ZZX9 128 aa3□□□□□ -1.93
USE1YGL098W COX2P00410 251 aa2.99□□□□□ -1.93
USE1YGL098W HIS1P00498 297 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W ILV5P06168 395 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W PAU19P0CE85 124 aa2.99□□□□□ -1.93
USE1YGL098W PAU21P0CE86 164 aa2.99□□□□□ -1.93
USE1YGL098W PAU22P0CE87 164 aa2.99□□□□□ -1.93
USE1YGL098W TY2A-FP0CX61 438 aa2.99□□□□□ -1.93
USE1YGL098W TY2A-GR2P0CX62 438 aa2.99□□□□□ -1.93
USE1YGL098W SST2P11972 698 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W CPR1P14832 162 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W ERS1P17261 260 aa2.99□□□□□ -1.93
USE1YGL098W PAU3P25610 124 aa2.99□□□□□ -1.93
USE1YGL098W POT1P27796 417 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
USE1YGL098W SSH4P32343 579 aa2.99□□□□□ -1.93
USE1YGL098W NTF2P33331 125 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W MTH1P35198 433 aa2.99□□□□□ -1.93
USE1YGL098W YCR087C-AP37263 153 aa2.99□□□□□ -1.93
USE1YGL098W MRPS9P38120 278 aa2.99□□□□□ -1.93
USE1YGL098W MRP21P38175 177 aa2.99□□□□□ -1.93
USE1YGL098W SHE1P38200 338 aa2.99□□□□□ -1.93
USE1YGL098W AIM3P38266 947 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W ARP1P38696 384 aa2.99□□□□□ -1.93
USE1YGL098W YHL044WP38727 235 aa2.99□□□□□ -1.93
USE1YGL098W AXL2P38928 823 aa2.99□□□□□ -1.93
USE1YGL098W LRO1P40345 661 aa2.99□□□□□ -1.93
USE1YGL098W MET28P40573 187 aa2.99□□□□□ -1.93
USE1YGL098W CAT5P41735 233 aa2.99□□□□□ -1.93
USE1YGL098W SSU1P41930 458 aa2.99□□□□□ -1.93
USE1YGL098W QRI7P43122 407 aa2.99□□□□□ -1.93
USE1YGL098W RRT5P43607 289 aa2.99□□□□□ -1.93
USE1YGL098W YHC3P47040 408 aa2.99□□□□□ -1.93
USE1YGL098W IBA57P47158 497 aa2.99□□□□□ -1.93
USE1YGL098W EXG2P52911 562 aa2.99□□□□□ -1.93
USE1YGL098W VPS73P53142 486 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W PNC1P53184 216 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W PEX31P53203 462 aa2.99□□□□□ -1.93
USE1YGL098W THG1P53215 237 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W YGR126WP53274 230 aa2.99□□□□□ -1.93
USE1YGL098W YGR283CP53336 341 aaPredicted RBP2.99□□□□□ -1.93
USE1YGL098W EOS1P53938 366 aa2.99□□□□□ -1.93
USE1YGL098W YKR011CQ02209 353 aa2.99□□□□□ -1.93
USE1YGL098W SPP2Q02521 185 aa2.99□□□□□ -1.93
USE1YGL098W CGI121Q03705 181 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W YDR248CQ03786 193 aa2.99□□□□□ -1.93
USE1YGL098W RIM13Q03792 727 aa2.99□□□□□ -1.93
USE1YGL098W UTP15Q04305 513 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W EMI1Q04406 187 aa2.99□□□□□ -1.93
USE1YGL098W NAT4Q04751 285 aa2.99□□□□□ -1.93
USE1YGL098W ERP1Q05359 219 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W RNH202Q05635 350 aa2.99□□□□□ -1.93
USE1YGL098W RRP45Q05636 305 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W ECM22Q05958 814 aaPredicted RBP2.99□□□□□ -1.93
USE1YGL098W BLS1Q06071 122 aa2.99□□□□□ -1.93
USE1YGL098W MCH1Q07376 486 aa2.99□□□□□ -1.93
USE1YGL098W IZH3Q07959 543 aa2.99□□□□□ -1.93
USE1YGL098W PAU23Q07987 124 aa2.99□□□□□ -1.93
USE1YGL098W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
USE1YGL098W GPB1Q08886 897 aa2.99□□□□□ -1.93
USE1YGL098W TMS1Q12116 473 aa2.99□□□□□ -1.93
USE1YGL098W TIR4Q12218 487 aaPredicted RBP2.99□□□□□ -1.93
USE1YGL098W YLR118CQ12354 227 aa2.99□□□□□ -1.93
USE1YGL098W PAU17Q12370 124 aa2.99□□□□□ -1.93
USE1YGL098W PCL9Q12477 304 aa2.99□□□□□ -1.93
USE1YGL098W AIM45Q12480 344 aaKnown RBP2.99□□□□□ -1.93
USE1YGL098W YJR112W-AQ3E743 109 aa2.99□□□□□ -1.93
USE1YGL098W SAL1D6W196 494 aa2.98□□□□□ -1.93
USE1YGL098W COX3P00420 269 aa2.98□□□□□ -1.93
USE1YGL098W PAI3P01094 68 aa2.98□□□□□ -1.93
USE1YGL098W MSW1P04803 379 aa2.98□□□□□ -1.93
USE1YGL098W PHO2P07269 559 aa2.98□□□□□ -1.93
USE1YGL098W RIP1P08067 215 aa2.98□□□□□ -1.93
USE1YGL098W RPS25BP0C0T4 108 aaKnown RBP2.98□□□□□ -1.93
USE1YGL098W TY2A-LR1P0C2J4 438 aa2.98□□□□□ -1.93
USE1YGL098W SCL1P21243 252 aaKnown RBP2.98□□□□□ -1.93
USE1YGL098W ADH7P25377 361 aa2.98□□□□□ -1.93
USE1YGL098W TY2A-CP25383 438 aa2.98□□□□□ -1.93
USE1YGL098W URK1P27515 501 aa2.98□□□□□ -1.93
USE1YGL098W SFP1P32432 683 aa2.98□□□□□ -1.93
USE1YGL098W LOT5P34234 306 aa2.98□□□□□ -1.93
USE1YGL098W YUH1P35127 236 aa2.98□□□□□ -1.93
USE1YGL098W LSM2P38203 95 aaKnown RBP2.98□□□□□ -1.93
USE1YGL098W YPC1P38298 316 aa2.98□□□□□ -1.93
USE1YGL098W SPC25P40014 221 aa2.98□□□□□ -1.93
USE1YGL098W STE24P47154 453 aa2.98□□□□□ -1.93
USE1YGL098W RPN14P53196 417 aa2.98□□□□□ -1.93
USE1YGL098W YAP1802P53309 568 aa2.98□□□□□ -1.93
USE1YGL098W PAU12P53343 120 aa2.98□□□□□ -1.93
USE1YGL098W IGO1P53897 168 aa2.98□□□□□ -1.93
USE1YGL098W ACT1P60010 375 aaKnown RBP2.98□□□□□ -1.93
USE1YGL098W MET14Q02196 202 aa2.98□□□□□ -1.93
USE1YGL098W CTF19Q02732 369 aa2.98□□□□□ -1.93
USE1YGL098W TY2A-DR2Q03483 438 aa2.98□□□□□ -1.93
USE1YGL098W TMA23Q03525 211 aa2.98□□□□□ -1.93
USE1YGL098W RCE1Q03530 315 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 142.2 ms