RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W ASN1P49089 572 aaKnown RBP3.62□□□□□ -1.83
UBP6YFR010W MRM2P53123 320 aa3.62□□□□□ -1.83
UBP6YFR010W COG7P53195 279 aa3.62□□□□□ -1.83
UBP6YFR010W PCP1P53259 346 aa3.62□□□□□ -1.83
UBP6YFR010W SMM1P53720 384 aaKnown RBP3.62□□□□□ -1.83
UBP6YFR010W TRM44Q02648 567 aaKnown RBP3.62□□□□□ -1.83
UBP6YFR010W YDR476CQ03362 224 aa3.62□□□□□ -1.83
UBP6YFR010W TDA1Q03533 586 aa3.62□□□□□ -1.83
UBP6YFR010W YDR249CQ03787 373 aa3.62□□□□□ -1.83
UBP6YFR010W BNA5Q05979 453 aa3.62□□□□□ -1.83
UBP6YFR010W YPR098CQ06089 161 aa3.62□□□□□ -1.83
UBP6YFR010W RRS1Q08746 203 aaKnown RBP3.62□□□□□ -1.83
UBP6YFR010W MMT2Q08970 484 aa3.62□□□□□ -1.83
UBP6YFR010W YLR126CQ12288 251 aa3.62□□□□□ -1.83
UBP6YFR010W YDL199CQ12407 687 aa3.62□□□□□ -1.83
UBP6YFR010W BI3Q9ZZW7 517 aa3.62□□□□□ -1.83
UBP6YFR010W STH1P32597 1359 aa3.61□□□□□ -1.83
UBP6YFR010W BAR1P12630 587 aa3.61□□□□□ -1.83
UBP6YFR010W MRPS28P21771 286 aa3.61□□□□□ -1.83
UBP6YFR010W RNA14P25298 677 aaKnown RBP3.61□□□□□ -1.83
UBP6YFR010W RPL16BP26785 198 aaKnown RBP3.61□□□□□ -1.83
UBP6YFR010W UTR4P32626 227 aa3.61□□□□□ -1.83
UBP6YFR010W MRPL3P36516 390 aa3.61□□□□□ -1.83
UBP6YFR010W YPC1P38298 316 aa3.61□□□□□ -1.83
UBP6YFR010W ATG12P38316 186 aa3.61□□□□□ -1.83
UBP6YFR010W RIO2P40160 425 aaKnown RBP3.61□□□□□ -1.83
UBP6YFR010W PGD1P40356 397 aa3.61□□□□□ -1.83
UBP6YFR010W SIM1P40472 476 aa3.61□□□□□ -1.83
UBP6YFR010W GLC8P41818 229 aa3.61□□□□□ -1.83
UBP6YFR010W SYF2P53277 215 aaPredicted RBP3.61□□□□□ -1.83
UBP6YFR010W LGE1Q02796 332 aaKnown RBP3.61□□□□□ -1.83
UBP6YFR010W PRP11Q07350 266 aaPredicted RBP3.61□□□□□ -1.83
UBP6YFR010W YLR012CQ07927 99 aa3.61□□□□□ -1.83
UBP6YFR010W GAT3Q07928 141 aa3.61□□□□□ -1.83
UBP6YFR010W YLR030WQ07967 263 aa3.61□□□□□ -1.83
UBP6YFR010W YOL024WQ08172 172 aa3.61□□□□□ -1.83
UBP6YFR010W SRL2Q12020 392 aa3.61□□□□□ -1.83
UBP6YFR010W YOR214CQ12282 236 aa3.61□□□□□ -1.83
UBP6YFR010W ERV2Q12284 196 aa3.61□□□□□ -1.83
UBP6YFR010W NCA2Q12374 616 aa3.61□□□□□ -1.83
UBP6YFR010W ORT1Q12375 292 aa3.61□□□□□ -1.83
UBP6YFR010W PEX11Q12462 236 aa3.61□□□□□ -1.83
UBP6YFR010W NUP157P40064 1391 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W BNR1P40450 1375 aa3.6□□□□□ -1.83
UBP6YFR010W RPL25P04456 142 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W CBP6P07253 162 aaPredicted RBP3.6□□□□□ -1.83
UBP6YFR010W MRS1P07266 363 aa3.6□□□□□ -1.83
UBP6YFR010W SPO12P17123 173 aa3.6□□□□□ -1.83
UBP6YFR010W SAM2P19358 384 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W NUP1P20676 1076 aa3.6□□□□□ -1.83
UBP6YFR010W PRE7P23724 241 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W TRX3P25372 127 aa3.6□□□□□ -1.83
UBP6YFR010W CPR3P25719 182 aa3.6□□□□□ -1.83
UBP6YFR010W SPT4P32914 102 aaPredicted RBP3.6□□□□□ -1.83
UBP6YFR010W LHP1P33399 275 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W ROT2P38138 954 aa3.6□□□□□ -1.83
UBP6YFR010W YBR285WP38354 144 aa3.6□□□□□ -1.83
UBP6YFR010W RCK1P38622 512 aa3.6□□□□□ -1.83
UBP6YFR010W ECM14P38836 430 aa3.6□□□□□ -1.83
UBP6YFR010W MDM31P38880 579 aa3.6□□□□□ -1.83
UBP6YFR010W GLE2P40066 365 aa3.6□□□□□ -1.83
UBP6YFR010W LSM4P40070 187 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W YMR144WP40214 342 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W PDS1P40316 373 aaPredicted RBP3.6□□□□□ -1.83
UBP6YFR010W PSA1P41940 361 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W MOB2P43563 287 aa3.6□□□□□ -1.83
UBP6YFR010W PMT4P46971 762 aa3.6□□□□□ -1.83
UBP6YFR010W CPR7P47103 393 aa3.6□□□□□ -1.83
UBP6YFR010W MCM22P47167 239 aa3.6□□□□□ -1.83
UBP6YFR010W UBC13P52490 153 aa3.6□□□□□ -1.83
UBP6YFR010W ORM1P53224 222 aa3.6□□□□□ -1.83
UBP6YFR010W IMP4P53941 290 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W HSK3P69852 69 aa3.6□□□□□ -1.83
UBP6YFR010W SAE3P89114 91 aa3.6□□□□□ -1.83
UBP6YFR010W YLR049CQ12110 428 aa3.6□□□□□ -1.83
UBP6YFR010W AHA1Q12449 350 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W MRX4Q12467 430 aa3.6□□□□□ -1.83
UBP6YFR010W YPR064WQ12492 139 aa3.6□□□□□ -1.83
UBP6YFR010W YIR021W-AQ3E739 70 aa3.6□□□□□ -1.83
UBP6YFR010W IGO2Q9P305 131 aa3.6□□□□□ -1.83
UBP6YFR010W SAL1D6W196 494 aa3.6□□□□□ -1.83
UBP6YFR010W PET9P18239 318 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W SCO1P23833 295 aa3.6□□□□□ -1.83
UBP6YFR010W RSA4P25382 515 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W PHD1P36093 366 aa3.6□□□□□ -1.83
UBP6YFR010W RIM2P38127 377 aa3.6□□□□□ -1.83
UBP6YFR010W ARC40P38328 384 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W YPT35P38815 214 aaKnown RBP3.6□□□□□ -1.83
UBP6YFR010W YIL067CP40514 678 aa3.6□□□□□ -1.83
UBP6YFR010W YIL029CP40538 142 aa3.6□□□□□ -1.83
UBP6YFR010W CDC1P40986 491 aa3.6□□□□□ -1.83
UBP6YFR010W FAR7P43592 221 aa3.6□□□□□ -1.83
UBP6YFR010W PAC10P48363 199 aa3.6□□□□□ -1.83
UBP6YFR010W TOS8P53147 276 aa3.6□□□□□ -1.83
UBP6YFR010W YGR017WP53210 297 aa3.6□□□□□ -1.83
UBP6YFR010W SPR6Q01684 191 aa3.6□□□□□ -1.83
UBP6YFR010W RAV2Q03956 351 aa3.6□□□□□ -1.83
UBP6YFR010W PLP1Q04004 230 aa3.6□□□□□ -1.83
UBP6YFR010W TAZ1Q06510 381 aa3.6□□□□□ -1.83
UBP6YFR010W ATP16Q12165 160 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms