RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W DED81P38707 554 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W ECM34P38728 170 aa3.72□□□□□ -1.81
TPA1YER049W YIL166CP40445 542 aa3.72□□□□□ -1.81
TPA1YER049W YIL060WP40519 144 aa3.72□□□□□ -1.81
TPA1YER049W UBX6P47049 396 aa3.72□□□□□ -1.81
TPA1YER049W YJR111CP47148 283 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W SRB7P47822 140 aa3.72□□□□□ -1.81
TPA1YER049W MOT3P54785 490 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W LUC7Q07508 261 aaPredicted RBP3.72□□□□□ -1.81
TPA1YER049W YEH1Q07804 573 aa3.72□□□□□ -1.81
TPA1YER049W SDO1Q07953 250 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W MMT2Q08970 484 aa3.72□□□□□ -1.81
TPA1YER049W YOR114WQ12219 294 aa3.72□□□□□ -1.81
TPA1YER049W POM34Q12445 299 aa3.72□□□□□ -1.81
TPA1YER049W YLR111WQ12528 110 aa3.72□□□□□ -1.81
TPA1YER049W ISN1Q99312 450 aa3.72□□□□□ -1.81
TPA1YER049W FUR1P18562 216 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W FPR1P20081 114 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W SUI1P32911 108 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W MRPL27P36526 146 aaPredicted RBP3.72□□□□□ -1.81
TPA1YER049W CDS1P38221 457 aa3.72□□□□□ -1.81
TPA1YER049W TRM7P38238 310 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W LNP1P38878 278 aa3.72□□□□□ -1.81
TPA1YER049W PGD1P40356 397 aa3.72□□□□□ -1.81
TPA1YER049W POG1P40473 351 aa3.72□□□□□ -1.81
TPA1YER049W SYS1P41544 203 aa3.72□□□□□ -1.81
TPA1YER049W SFH5P47008 294 aa3.72□□□□□ -1.81
TPA1YER049W LSM8P47093 109 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W MCM22P47167 239 aa3.72□□□□□ -1.81
TPA1YER049W CCC1P47818 322 aa3.72□□□□□ -1.81
TPA1YER049W ASK10P48361 1146 aa3.72□□□□□ -1.81
TPA1YER049W LYS20P48570 428 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W YGR250CP53316 781 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W SNO4Q04902 237 aa3.72□□□□□ -1.81
TPA1YER049W RBS1Q05672 457 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W HSP33Q08914 237 aaKnown RBP3.72□□□□□ -1.81
TPA1YER049W FMP40Q08968 688 aaPredicted RBP3.72□□□□□ -1.81
TPA1YER049W HSP32Q08992 237 aa3.72□□□□□ -1.81
TPA1YER049W DGK1Q12382 290 aa3.72□□□□□ -1.81
TPA1YER049W TFC7Q12415 435 aa3.72□□□□□ -1.81
TPA1YER049W TDH2P00358 332 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W GAL4P04386 881 aa3.71□□□□□ -1.82
TPA1YER049W MET3P08536 511 aa3.71□□□□□ -1.82
TPA1YER049W ZRC1P20107 442 aa3.71□□□□□ -1.82
TPA1YER049W CPR4P25334 318 aa3.71□□□□□ -1.82
TPA1YER049W TRR1P29509 319 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W TIM12P32830 109 aa3.71□□□□□ -1.82
TPA1YER049W VAM7P32912 316 aa3.71□□□□□ -1.82
TPA1YER049W SHM2P37291 469 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W PRS3P38689 320 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W PHO90P39535 881 aa3.71□□□□□ -1.82
TPA1YER049W OTU1P43558 301 aa3.71□□□□□ -1.82
TPA1YER049W YHC3P47040 408 aa3.71□□□□□ -1.82
TPA1YER049W YGR042WP53227 271 aa3.71□□□□□ -1.82
TPA1YER049W RSM27P53305 110 aa3.71□□□□□ -1.82
TPA1YER049W FMP41P53889 259 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W ERV25P54837 211 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W YMR279CQ03263 540 aa3.71□□□□□ -1.82
TPA1YER049W NOC4Q06512 552 aaPredicted RBP3.71□□□□□ -1.82
TPA1YER049W YPD1Q07688 167 aa3.71□□□□□ -1.82
TPA1YER049W AIM6Q07716 390 aa3.71□□□□□ -1.82
TPA1YER049W BRX1Q08235 291 aaKnown RBP3.71□□□□□ -1.82
TPA1YER049W ZEO1Q08245 113 aa3.71□□□□□ -1.82
TPA1YER049W PFA4Q12006 378 aa3.71□□□□□ -1.82
TPA1YER049W HIP1P06775 603 aa3.7□□□□□ -1.82
TPA1YER049W OAR1P35731 278 aa3.7□□□□□ -1.82
TPA1YER049W TAE1P38340 232 aa3.7□□□□□ -1.82
TPA1YER049W ANS1P38832 159 aa3.7□□□□□ -1.82
TPA1YER049W BFR1P38934 470 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
TPA1YER049W SMK1P41808 388 aa3.7□□□□□ -1.82
TPA1YER049W YDL183CP48569 320 aa3.7□□□□□ -1.82
TPA1YER049W NIF3P53081 288 aa3.7□□□□□ -1.82
TPA1YER049W CGR1P53188 120 aa3.7□□□□□ -1.82
TPA1YER049W YNR071CP53757 342 aa3.7□□□□□ -1.82
TPA1YER049W EST3Q03096 181 aa3.7□□□□□ -1.82
TPA1YER049W BNA7Q04066 261 aa3.7□□□□□ -1.82
TPA1YER049W YPR091CQ06833 770 aa3.7□□□□□ -1.82
TPA1YER049W IRC13Q08630 104 aa3.7□□□□□ -1.82
TPA1YER049W YOR365CQ08844 703 aa3.7□□□□□ -1.82
TPA1YER049W YPR063CQ12160 140 aa3.7□□□□□ -1.82
TPA1YER049W CMC2Q3E7A4 109 aa3.7□□□□□ -1.82
TPA1YER049W CCH1P50077 2039 aa3.7□□□□□ -1.82
TPA1YER049W SSA3P09435 649 aaKnown RBP3.7□□□□□ -1.82
TPA1YER049W MATALPHA1P0CY06 175 aa3.7□□□□□ -1.82
TPA1YER049W HMLALPHA1P0CY07 175 aa3.7□□□□□ -1.82
TPA1YER049W SCL1P21243 252 aaKnown RBP3.7□□□□□ -1.82
TPA1YER049W PRE2P30656 287 aaKnown RBP3.7□□□□□ -1.82
TPA1YER049W CHK1P38147 527 aa3.7□□□□□ -1.82
TPA1YER049W ERV15P38312 142 aa3.7□□□□□ -1.82
TPA1YER049W VBA2P38358 474 aaKnown RBP3.7□□□□□ -1.82
TPA1YER049W IMD2P38697 523 aaKnown RBP3.7□□□□□ -1.82
TPA1YER049W PUG1P40100 303 aa3.7□□□□□ -1.82
TPA1YER049W OSW5P40219 148 aa3.7□□□□□ -1.82
TPA1YER049W MOG1P47123 218 aa3.7□□□□□ -1.82
TPA1YER049W YGL117WP53133 265 aa3.7□□□□□ -1.82
TPA1YER049W PEF1P53238 335 aa3.7□□□□□ -1.82
TPA1YER049W YNR062CP53748 327 aa3.7□□□□□ -1.82
TPA1YER049W GIM3P53900 129 aa3.7□□□□□ -1.82
TPA1YER049W SMA2Q04658 369 aa3.7□□□□□ -1.82
TPA1YER049W MDM30Q05930 598 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms