RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	MIT1	P40002	666 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	TNA1	P53322	534 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	RPP2A	P05319	106 aa	Known RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	YIM1	P28625	365 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	MSS1	P32559	526 aa	Predicted RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	PRS4	P38063	326 aa	Predicted RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	SRO77	P38163	1010 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	YBR137W	P38276	179 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	SKN7	P38889	622 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	PZF1	P39933	429 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	YMR144W	P40214	342 aa	Known RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	CPR8	P53728	308 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	RSM10	Q03201	203 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	MRPL51	Q06090	140 aa	Predicted RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	YOL107W	Q12239	342 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	YPL119C-A	Q3E751	87 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	ECM34	P38728	170 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	CTK2	P46962	323 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	RSM24	Q03976	319 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	YMR310C	Q04867	317 aa	Predicted RBP	4.22	□□□□□ -1.73
PDR15	YDR406W	FMP16	Q12497	93 aa		4.22	□□□□□ -1.73
PDR15	YDR406W	BUD23	P25627	275 aa	Predicted RBP	4.21	□□□□□ -1.73
PDR15	YDR406W	YHR180W	P38868	163 aa		4.21	□□□□□ -1.73
PDR15	YDR406W	MNN5	P46982	586 aa		4.21	□□□□□ -1.73
PDR15	YDR406W	LYS20	P48570	428 aa	Known RBP	4.21	□□□□□ -1.73
PDR15	YDR406W	YGL114W	P53134	725 aa		4.21	□□□□□ -1.73
PDR15	YDR406W	CDH1	P53197	566 aa		4.21	□□□□□ -1.73
PDR15	YDR406W	SUR7	P54003	302 aa		4.21	□□□□□ -1.73
PDR15	YDR406W	YVH1	Q02256	364 aa	Known RBP	4.21	□□□□□ -1.73
PDR15	YDR406W	IZH1	Q03419	316 aa		4.21	□□□□□ -1.73
PDR15	YDR406W	LYS21	Q12122	440 aa	Known RBP	4.21	□□□□□ -1.73
PDR15	YDR406W	THI2	P38141	450 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	ALG14	P38242	237 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	PRE6	P40303	254 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	YPS6	P40583	537 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	IRC7	P43623	340 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	UFD1	P53044	361 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	YGL117W	P53133	265 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	YOL162W	P0CF19	215 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	PRE4	P30657	266 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	YKL071W	P36086	256 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	MBA1	P38300	278 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	MSE1	P48525	536 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	ALG9	P53868	555 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	YPR147C	Q06522	304 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	MSB2	P32334	1306 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	RPL27A	P0C2H6	136 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	RPL27B	P0C2H7	136 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	ARF1	P11076	181 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	NHP6B	P11633	99 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	HOM6	P31116	359 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
PDR15	YDR406W	BUD8	P41698	603 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	YAE1	P47118	141 aa	Predicted RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	RIB4	P50861	169 aa	Predicted RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	DID2	P69771	204 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	HNT1	Q04344	158 aa	Known RBP	4.21	□□□□□ -1.74
PDR15	YDR406W	LIP2	Q06005	328 aa		4.21	□□□□□ -1.74
PDR15	YDR406W	SCEI	P03882	235 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	MAL32	P38158	584 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	YBR242W	P38331	238 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	VMA22	P38784	181 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	SLX9	P53251	210 aa	Predicted RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	SYF2	P53277	215 aa	Predicted RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	MAL12	P53341	584 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	CAB5	Q03941	241 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	YPS7	Q06325	596 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	NOC4	Q06512	552 aa	Predicted RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	YEL009C-A	A0A023PZF2	135 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	TRP4	P07285	380 aa	Predicted RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	RIP1	P08067	215 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	PTC6	P25646	442 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	SHE1	P38200	338 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	ARO9	P38840	513 aa	Predicted RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	TIF11	P38912	153 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	FMP52	P40008	231 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	YIP1	P53039	248 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	PNC1	P53184	216 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	JAC1	P53193	184 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	BUD9	P53226	547 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	ERG13	P54839	491 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	PAM18	Q07914	168 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	SPC3	Q12133	184 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	NFT1	P0CE68	1218 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	CHA1	P25379	360 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	YCR102C	P25608	368 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	FMP46	P36141	133 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	DTR1	P38125	572 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	PFS2	P42841	465 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	LSB3	P43603	459 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	MTL1	P53214	551 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	RHO5	P53879	331 aa	Known RBP	4.2	□□□□□ -1.74
PDR15	YDR406W	COQ10	Q08058	207 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	YPR022C	Q12139	1133 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	RTR2	Q12378	196 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	YLR099W-A	Q3E798	87 aa		4.2	□□□□□ -1.74
PDR15	YDR406W	YML003W	P0CF16	290 aa		4.19	□□□□□ -1.74
PDR15	YDR406W	SEC62	P21825	274 aa		4.19	□□□□□ -1.74
PDR15	YDR406W	REC114	P32841	428 aa		4.19	□□□□□ -1.74
PDR15	YDR406W	SEH1	P53011	349 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms