RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W YOR114WQ12219 294 aa3.99□□□□□ -1.77
UBC1YDR177W IZH2Q12442 317 aa3.99□□□□□ -1.77
UBC1YDR177W YPL119C-AQ3E751 87 aa3.99□□□□□ -1.77
UBC1YDR177W GEA1P47102 1408 aaPredicted RBP3.98□□□□□ -1.77
UBC1YDR177W YMR316C-AI2HB70 103 aa3.98□□□□□ -1.77
UBC1YDR177W RPL28P02406 149 aaKnown RBP3.98□□□□□ -1.77
UBC1YDR177W RPP0P05317 312 aaKnown RBP3.98□□□□□ -1.77
UBC1YDR177W SGE1P33335 543 aa3.98□□□□□ -1.77
UBC1YDR177W JEN1P36035 616 aa3.98□□□□□ -1.77
UBC1YDR177W RFT1P38206 574 aaPredicted RBP3.98□□□□□ -1.77
UBC1YDR177W PET8P38921 284 aa3.98□□□□□ -1.77
UBC1YDR177W SEC72P39742 193 aaKnown RBP3.98□□□□□ -1.77
UBC1YDR177W YER184CP39961 794 aa3.98□□□□□ -1.77
UBC1YDR177W JHD2P47156 728 aaPredicted RBP3.98□□□□□ -1.77
UBC1YDR177W CWC23P52868 283 aaPredicted RBP3.98□□□□□ -1.77
UBC1YDR177W YNR066CP53752 436 aa3.98□□□□□ -1.77
UBC1YDR177W SKI8Q02793 397 aaPredicted RBP3.98□□□□□ -1.77
UBC1YDR177W HEM25Q07534 307 aa3.98□□□□□ -1.77
UBC1YDR177W YDL144CQ07589 356 aa3.98□□□□□ -1.77
UBC1YDR177W FOL3Q12676 427 aaPredicted RBP3.98□□□□□ -1.77
UBC1YDR177W RPS14AP06367 137 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W PET494P07390 489 aaPredicted RBP3.97□□□□□ -1.77
UBC1YDR177W SPT15P13393 240 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W BGL2P15703 313 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W AAT2P23542 418 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W YCR102CP25608 368 aa3.97□□□□□ -1.77
UBC1YDR177W YBR241CP38142 488 aa3.97□□□□□ -1.77
UBC1YDR177W WSC4P38739 605 aa3.97□□□□□ -1.77
UBC1YDR177W RPS14BP39516 138 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W PTI1P39927 425 aaPredicted RBP3.97□□□□□ -1.77
UBC1YDR177W VAB2P40003 282 aa3.97□□□□□ -1.77
UBC1YDR177W KRE29P40026 464 aa3.97□□□□□ -1.77
UBC1YDR177W ATG18P43601 500 aa3.97□□□□□ -1.77
UBC1YDR177W NSA1P53136 463 aaPredicted RBP3.97□□□□□ -1.77
UBC1YDR177W SDS23P53172 527 aa3.97□□□□□ -1.77
UBC1YDR177W YGL039WP53183 348 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W TPS1Q00764 495 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W YDR222WQ04925 415 aa3.97□□□□□ -1.77
UBC1YDR177W PEX10Q05568 337 aa3.97□□□□□ -1.77
UBC1YDR177W CDC123Q05791 360 aa3.97□□□□□ -1.77
UBC1YDR177W ARC18Q05933 178 aaKnown RBP3.97□□□□□ -1.77
UBC1YDR177W MFG1Q07684 458 aa3.97□□□□□ -1.77
UBC1YDR177W DCN1Q12395 269 aa3.97□□□□□ -1.77
UBC1YDR177W CDC10P25342 322 aaKnown RBP3.96□□□□□ -1.78
UBC1YDR177W CSE2P33308 149 aa3.96□□□□□ -1.78
UBC1YDR177W MED8P38304 223 aa3.96□□□□□ -1.78
UBC1YDR177W URA8P38627 578 aaPredicted RBP3.96□□□□□ -1.78
UBC1YDR177W IKI1P38874 309 aa3.96□□□□□ -1.78
UBC1YDR177W YHB1P39676 399 aaKnown RBP3.96□□□□□ -1.78
UBC1YDR177W PAN6P40459 309 aa3.96□□□□□ -1.78
UBC1YDR177W RMR1P53060 241 aa3.96□□□□□ -1.78
UBC1YDR177W CDC14Q00684 551 aa3.96□□□□□ -1.78
UBC1YDR177W MCT1Q12283 360 aa3.96□□□□□ -1.78
UBC1YDR177W ARO1P08566 1588 aaKnown RBP3.96□□□□□ -1.78
UBC1YDR177W CHC1P22137 1653 aaKnown RBP3.96□□□□□ -1.78
UBC1YDR177W RPL4AP10664 362 aaKnown RBP3.95□□□□□ -1.78
UBC1YDR177W MRPL39P36533 70 aa3.95□□□□□ -1.78
UBC1YDR177W REE1P40893 198 aa3.95□□□□□ -1.78
UBC1YDR177W STB1P42845 420 aa3.95□□□□□ -1.78
UBC1YDR177W RPL4BP49626 362 aaKnown RBP3.95□□□□□ -1.78
UBC1YDR177W BNS1P50084 137 aa3.95□□□□□ -1.78
UBC1YDR177W YGR015CP53208 328 aa3.95□□□□□ -1.78
UBC1YDR177W SLX9P53251 210 aaPredicted RBP3.95□□□□□ -1.78
UBC1YDR177W MRS2Q01926 470 aa3.95□□□□□ -1.78
UBC1YDR177W CTF19Q02732 369 aa3.95□□□□□ -1.78
UBC1YDR177W ELP3Q02908 557 aaKnown RBP3.95□□□□□ -1.78
UBC1YDR177W ADD37Q03233 198 aa3.95□□□□□ -1.78
UBC1YDR177W GIM5Q04493 163 aa3.95□□□□□ -1.78
UBC1YDR177W SMD2Q06217 110 aaKnown RBP3.95□□□□□ -1.78
UBC1YDR177W YLR177WQ06251 628 aa3.95□□□□□ -1.78
UBC1YDR177W GPM2Q12008 311 aa3.95□□□□□ -1.78
UBC1YDR177W RFM1Q12192 310 aa3.95□□□□□ -1.78
UBC1YDR177W ERV2Q12284 196 aa3.95□□□□□ -1.78
UBC1YDR177W RPL21BQ12672 160 aaKnown RBP3.95□□□□□ -1.78
UBC1YDR177W YER078W-AQ3E7A2 54 aa3.95□□□□□ -1.78
UBC1YDR177W RPS8AP0CX39 200 aaKnown RBP3.94□□□□□ -1.78
UBC1YDR177W RPS8BP0CX40 200 aaKnown RBP3.94□□□□□ -1.78
UBC1YDR177W VPH2P32341 215 aa3.94□□□□□ -1.78
UBC1YDR177W GDH2P33327 1092 aaKnown RBP3.94□□□□□ -1.78
UBC1YDR177W AST1P35183 429 aa3.94□□□□□ -1.78
UBC1YDR177W ATG12P38316 186 aa3.94□□□□□ -1.78
UBC1YDR177W YHR127WP38833 243 aaKnown RBP3.94□□□□□ -1.78
UBC1YDR177W SUR2P38992 349 aa3.94□□□□□ -1.78
UBC1YDR177W OXA1P39952 402 aa3.94□□□□□ -1.78
UBC1YDR177W YJR054WP47114 497 aa3.94□□□□□ -1.78
UBC1YDR177W ADO1P47143 340 aaKnown RBP3.94□□□□□ -1.78
UBC1YDR177W TPC1P53257 314 aa3.94□□□□□ -1.78
UBC1YDR177W FYV6P53913 173 aa3.94□□□□□ -1.78
UBC1YDR177W YPR147CQ06522 304 aaKnown RBP3.94□□□□□ -1.78
UBC1YDR177W YOR292CQ08743 309 aa3.94□□□□□ -1.78
UBC1YDR177W MMT2Q08970 484 aa3.94□□□□□ -1.78
UBC1YDR177W TPI1P00942 248 aaKnown RBP3.93□□□□□ -1.78
UBC1YDR177W BCY1P07278 416 aaKnown RBP3.93□□□□□ -1.78
UBC1YDR177W ASP3-2P0CX77 362 aa3.93□□□□□ -1.78
UBC1YDR177W ASP3-3P0CX78 362 aa3.93□□□□□ -1.78
UBC1YDR177W ASP3-4P0CX79 362 aa3.93□□□□□ -1.78
UBC1YDR177W ASP3-1P0CZ17 362 aa3.93□□□□□ -1.78
UBC1YDR177W HEK2P38199 381 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBC1YDR177W SHE1P38200 338 aa3.93□□□□□ -1.78
UBC1YDR177W SHE3P38272 425 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms