RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C COY1P34237 679 aa1.14□□□□□ -2.23
SWI5YDR146C DRE2P36152 348 aa1.14□□□□□ -2.23
SWI5YDR146C RTT105P40063 208 aa1.14□□□□□ -2.23
SWI5YDR146C TAD2P47058 250 aa1.14□□□□□ -2.23
SWI5YDR146C YJR141WP47172 347 aaPredicted RBP1.14□□□□□ -2.23
SWI5YDR146C MAL13P53338 473 aa1.14□□□□□ -2.23
SWI5YDR146C COX20Q04935 205 aa1.14□□□□□ -2.23
SWI5YDR146C INO80P53115 1489 aa1.14□□□□□ -2.23
SWI5YDR146C POL30P15873 258 aaKnown RBP1.13□□□□□ -2.23
SWI5YDR146C CLB6P32943 380 aa1.13□□□□□ -2.23
SWI5YDR146C RIB7P33312 244 aa1.13□□□□□ -2.23
SWI5YDR146C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
SWI5YDR146C COG3P40094 801 aa1.13□□□□□ -2.23
SWI5YDR146C YER188WP40103 239 aa1.13□□□□□ -2.23
SWI5YDR146C MEP1P40260 492 aa1.13□□□□□ -2.23
SWI5YDR146C YJL028WP47062 111 aa1.13□□□□□ -2.23
SWI5YDR146C MDM34P53083 459 aa1.13□□□□□ -2.23
SWI5YDR146C AAH1P53909 347 aa1.13□□□□□ -2.23
SWI5YDR146C EMI1Q04406 187 aa1.13□□□□□ -2.23
SWI5YDR146C PLB3Q08108 686 aa1.13□□□□□ -2.23
SWI5YDR146C PER33Q12144 273 aa1.13□□□□□ -2.23
SWI5YDR146C POX1P13711 748 aa1.13□□□□□ -2.23
SWI5YDR146C DPB2P24482 689 aaPredicted RBP1.13□□□□□ -2.23
SWI5YDR146C RRT12P25381 491 aa1.13□□□□□ -2.23
SWI5YDR146C RPT5P33297 434 aaKnown RBP1.13□□□□□ -2.23
SWI5YDR146C SFC1P33303 322 aa1.13□□□□□ -2.23
SWI5YDR146C HEK2P38199 381 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
SWI5YDR146C TEM1P38987 245 aa1.13□□□□□ -2.23
SWI5YDR146C YGL034CP53186 121 aa1.13□□□□□ -2.23
SWI5YDR146C TIM21P53220 239 aa1.13□□□□□ -2.23
SWI5YDR146C RGM1Q00453 211 aa1.13□□□□□ -2.23
SWI5YDR146C RSM10Q03201 203 aa1.13□□□□□ -2.23
SWI5YDR146C OST6Q03723 332 aa1.13□□□□□ -2.23
SWI5YDR146C YMR114CQ04471 368 aaKnown RBP1.13□□□□□ -2.23
SWI5YDR146C CTR3Q06686 241 aa1.13□□□□□ -2.23
SWI5YDR146C SNF8Q12483 233 aa1.13□□□□□ -2.23
SWI5YDR146C YEL009C-AA0A023PZF2 135 aa1.12□□□□□ -2.23
SWI5YDR146C RAD10P06838 210 aa1.12□□□□□ -2.23
SWI5YDR146C SGA1P08019 549 aa1.12□□□□□ -2.23
SWI5YDR146C MSF1P08425 469 aa1.12□□□□□ -2.23
SWI5YDR146C NBP1P52919 319 aaPredicted RBP1.12□□□□□ -2.23
SWI5YDR146C SLX9P53251 210 aaPredicted RBP1.12□□□□□ -2.23
SWI5YDR146C CGI121Q03705 181 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C KAP95Q06142 861 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C RPL24AP04449 155 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C MRPL37P36532 105 aa1.12□□□□□ -2.23
SWI5YDR146C PRS2P38620 318 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C SMB1P40018 196 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C TIF34P40217 347 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C MNN5P46982 586 aa1.12□□□□□ -2.23
SWI5YDR146C YJL016WP47072 561 aa1.12□□□□□ -2.23
SWI5YDR146C EMC2P47133 292 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C MYO5Q04439 1219 aaKnown RBP1.12□□□□□ -2.23
SWI5YDR146C YPL150WQ12152 901 aa1.12□□□□□ -2.23
SWI5YDR146C EMP46Q12396 444 aa1.12□□□□□ -2.23
SWI5YDR146C SCO1P23833 295 aa1.11□□□□□ -2.23
SWI5YDR146C MRX3P38172 270 aa1.11□□□□□ -2.23
SWI5YDR146C MRPL49P40858 161 aaPredicted RBP1.11□□□□□ -2.23
SWI5YDR146C GON7P46984 123 aa1.11□□□□□ -2.23
SWI5YDR146C YJL118WP47022 219 aa1.11□□□□□ -2.23
SWI5YDR146C NIF3P53081 288 aa1.11□□□□□ -2.23
SWI5YDR146C GRH1Q04410 372 aaKnown RBP1.11□□□□□ -2.23
SWI5YDR146C BOP2Q06150 570 aa1.11□□□□□ -2.23
SWI5YDR146C GEP5Q12393 293 aa1.11□□□□□ -2.23
SWI5YDR146C HIS1P00498 297 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C SNF6P18888 332 aa1.1□□□□□ -2.23
SWI5YDR146C HOM6P31116 359 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C QRI5P32344 111 aa1.1□□□□□ -2.23
SWI5YDR146C YBR096WP38256 230 aa1.1□□□□□ -2.23
SWI5YDR146C GLG2P47011 380 aa1.1□□□□□ -2.23
SWI5YDR146C YJR012CP47087 207 aa1.1□□□□□ -2.23
SWI5YDR146C COS6P53344 381 aa1.1□□□□□ -2.23
SWI5YDR146C ALG11P53954 548 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C ADH6Q04894 360 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C CDD1Q06549 142 aa1.1□□□□□ -2.23
SWI5YDR146C COQ10Q08058 207 aa1.1□□□□□ -2.23
SWI5YDR146C FKS1P38631 1876 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C RNP1P32385 249 aa1.1□□□□□ -2.23
SWI5YDR146C PRS4P38063 326 aaPredicted RBP1.1□□□□□ -2.23
SWI5YDR146C SPT8P38915 602 aa1.1□□□□□ -2.23
SWI5YDR146C THO1P40040 218 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C CTF19Q02732 369 aa1.1□□□□□ -2.23
SWI5YDR146C EBS1Q03466 884 aaKnown RBP1.1□□□□□ -2.23
SWI5YDR146C PEX12Q04370 399 aa1.1□□□□□ -2.23
SWI5YDR146C YPL119C-AQ3E751 87 aa1.1□□□□□ -2.23
SWI5YDR146C MAL32P38158 584 aa1.09□□□□□ -2.23
SWI5YDR146C SMD3P43321 101 aaKnown RBP1.09□□□□□ -2.23
SWI5YDR146C MRH4P53166 561 aa1.09□□□□□ -2.23
SWI5YDR146C MAL12P53341 584 aa1.09□□□□□ -2.23
SWI5YDR146C MPP6P53725 186 aaPredicted RBP1.09□□□□□ -2.23
SWI5YDR146C PEX10Q05568 337 aa1.09□□□□□ -2.23
SWI5YDR146C RDS3Q06835 107 aaPredicted RBP1.09□□□□□ -2.23
SWI5YDR146C SDO1Q07953 250 aaKnown RBP1.09□□□□□ -2.23
SWI5YDR146C RRT8Q08219 342 aa1.09□□□□□ -2.23
SWI5YDR146C YOR283WQ12040 230 aaKnown RBP1.09□□□□□ -2.23
SWI5YDR146C DAL82P21705 255 aa1.09□□□□□ -2.24
SWI5YDR146C SEC22P22214 214 aa1.09□□□□□ -2.24
SWI5YDR146C VPS3P23643 1011 aa1.09□□□□□ -2.24
SWI5YDR146C GOS1P38736 223 aa1.09□□□□□ -2.24
SWI5YDR146C YHL026CP38740 315 aa1.09□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 99.1 ms