RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOB1	YDR110W	TSA2	Q04120	196 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	BNA5	Q05979	453 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	HEM25	Q07534	307 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	PST2	Q12335	198 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	PSF1	Q12488	208 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	EDE1	P34216	1381 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	MHP1	P43638	1398 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	RPL31A	P0C2H8	113 aa	Known RBP	4.93	□□□□□ -1.62
FOB1	YDR110W	MRPS28	P21771	286 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	PPH21	P23594	369 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	MGT1	P26188	188 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	ZRT1	P32804	376 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	SFK1	P35735	353 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	RFC5	P38251	354 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	DBP8	P38719	431 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	BIR1	P47134	954 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	CDH1	P53197	566 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	CPR8	P53728	308 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	BOR1	P53838	576 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	PKR1	Q03880	122 aa	Known RBP	4.93	□□□□□ -1.62
FOB1	YDR110W	HSP31	Q04432	237 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	PEX30	Q06169	523 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	IZH3	Q07959	543 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	PDR18	P53756	1333 aa		4.93	□□□□□ -1.62
FOB1	YDR110W	CDC7	P06243	507 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	RNA14	P25298	677 aa	Known RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	BUB2	P26448	306 aa	Predicted RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	INO2	P26798	304 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	ACB1	P31787	87 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	KRE29	P40026	464 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YJR012C	P47087	207 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	DID2	P69771	204 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	SLU7	Q02775	382 aa	Known RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	HNT1	Q04344	158 aa	Known RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	YML053C	Q04978	212 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	RKI1	Q12189	258 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YIR021W-A	Q3E739	70 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	SNF2	P22082	1703 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	DDI2	P0CH63	225 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	DDI3	P0CH64	225 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	ARF1	P11076	181 aa	Known RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	FCY2	P17064	533 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	ARF2	P19146	181 aa	Known RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	SCO1	P23833	295 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	PHA2	P32452	334 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YKL075C	P36083	450 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	SRL3	P36167	246 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YBR220C	P38318	560 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YBR285W	P38354	144 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	MAM33	P40513	266 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	FAR7	P43592	221 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	CHA4	P43634	648 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YNL040W	P53960	456 aa	Predicted RBP	4.92	□□□□□ -1.62
FOB1	YDR110W	ASI3	P53983	676 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	HSK3	P69852	69 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YDR391C	Q04170	232 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	HPF1	Q05164	967 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YDL009C	Q12210	107 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	YOP1	Q12402	180 aa		4.92	□□□□□ -1.62
FOB1	YDR110W	REP1	P03871	373 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	HEM2	P05373	342 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	RAD52	P06778	471 aa	Known RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	SEC14	P24280	304 aa	Known RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	CNB1	P25296	175 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	FUN19	P28003	413 aa	Predicted RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	MKK1	P32490	508 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	MRPL28	P36527	147 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	LSM12	P38828	187 aa	Known RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	FAA2	P39518	744 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	RFC2	P40348	353 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	YFL064C	P43540	174 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	CTH1	P47976	325 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	RBL2	P48606	106 aa	Known RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	LST7	P53237	242 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	SYF2	P53277	215 aa	Predicted RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	HST3	P53687	447 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	ERG5	P54781	538 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	ELP3	Q02908	557 aa	Known RBP	4.91	□□□□□ -1.62
FOB1	YDR110W	SDH7	Q04401	133 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	YMR320W	Q04897	101 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	YPR202W	Q08993	238 aa		4.91	□□□□□ -1.62
FOB1	YDR110W	BCY1	P07278	416 aa	Known RBP	4.9	□□□□□ -1.62
FOB1	YDR110W	ERD2	P18414	219 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	FPS1	P23900	669 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	HYM1	P32464	399 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	ASH1	P34233	588 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YPT10	P38146	199 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YIL067C	P40514	678 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	LSB3	P43603	459 aa	Known RBP	4.9	□□□□□ -1.62
FOB1	YDR110W	MST27	P53176	234 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	RIM8	P53179	542 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YGR017W	P53210	297 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	PDR17	P53844	350 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	SUR7	P54003	302 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YDR387C	Q04162	555 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YDR124W	Q04608	324 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YDR278C	Q05612	105 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	PRP11	Q07350	266 aa	Predicted RBP	4.9	□□□□□ -1.62
FOB1	YDR110W	MMT2	Q08970	484 aa		4.9	□□□□□ -1.62
FOB1	YDR110W	YOR214C	Q12282	236 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 55.1 ms