RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C ATP23P53722 227 aa3.7□□□□□ -1.82
CDC9YDL164C YMR181CQ03231 154 aa3.7□□□□□ -1.82
CDC9YDL164C SPC24Q04477 213 aa3.7□□□□□ -1.82
CDC9YDL164C FAR10Q06001 478 aa3.7□□□□□ -1.82
CDC9YDL164C EMP46Q12396 444 aa3.7□□□□□ -1.82
CDC9YDL164C CSR2Q12734 1121 aa3.7□□□□□ -1.82
CDC9YDL164C RPL23AP0CX41 137 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C RPL23BP0CX42 137 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C DPM1P14020 267 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C MDM10P18409 493 aa3.69□□□□□ -1.82
CDC9YDL164C MED8P38304 223 aa3.69□□□□□ -1.82
CDC9YDL164C CUE1P38428 203 aa3.69□□□□□ -1.82
CDC9YDL164C MDM31P38880 579 aa3.69□□□□□ -1.82
CDC9YDL164C KRE29P40026 464 aa3.69□□□□□ -1.82
CDC9YDL164C NUP49Q02199 472 aa3.69□□□□□ -1.82
CDC9YDL164C PDR5P33302 1511 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C GEA2P39993 1459 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C ULS1Q08562 1619 aa3.69□□□□□ -1.82
CDC9YDL164C YHL049CP38722 271 aa3.69□□□□□ -1.82
CDC9YDL164C DFG10P40526 253 aa3.69□□□□□ -1.82
CDC9YDL164C FMP32P43557 207 aa3.69□□□□□ -1.82
CDC9YDL164C MCM22P47167 239 aa3.69□□□□□ -1.82
CDC9YDL164C POP6P53218 158 aa3.69□□□□□ -1.82
CDC9YDL164C SUN4P53616 420 aa3.69□□□□□ -1.82
CDC9YDL164C RPL15BP54780 204 aaPredicted RBP3.69□□□□□ -1.82
CDC9YDL164C YPR098CQ06089 161 aa3.69□□□□□ -1.82
CDC9YDL164C GAS2Q06135 555 aa3.69□□□□□ -1.82
CDC9YDL164C SNX3Q08826 162 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C YOR283WQ12040 230 aaKnown RBP3.69□□□□□ -1.82
CDC9YDL164C NSL1Q12143 216 aa3.69□□□□□ -1.82
CDC9YDL164C YER190C-BP0CX94 160 aa3.68□□□□□ -1.82
CDC9YDL164C YEL077W-AP0CX95 160 aa3.68□□□□□ -1.82
CDC9YDL164C YGR296C-BP0CX96 160 aa3.68□□□□□ -1.82
CDC9YDL164C YPL283W-BP0CX97 160 aa3.68□□□□□ -1.82
CDC9YDL164C YPR204C-AP0CX98 160 aa3.68□□□□□ -1.82
CDC9YDL164C ISY1P21374 235 aaPredicted RBP3.68□□□□□ -1.82
CDC9YDL164C RNQ1P25367 405 aa3.68□□□□□ -1.82
CDC9YDL164C AEP1P32493 518 aa3.68□□□□□ -1.82
CDC9YDL164C PEX22P39718 180 aa3.68□□□□□ -1.82
CDC9YDL164C PRE6P40303 254 aaKnown RBP3.68□□□□□ -1.82
CDC9YDL164C OST1P41543 476 aaKnown RBP3.68□□□□□ -1.82
CDC9YDL164C YJL016WP47072 561 aa3.68□□□□□ -1.82
CDC9YDL164C BRR6P53062 197 aa3.68□□□□□ -1.82
CDC9YDL164C NSA1P53136 463 aaPredicted RBP3.68□□□□□ -1.82
CDC9YDL164C RCF2P53721 224 aa3.68□□□□□ -1.82
CDC9YDL164C YMR279CQ03263 540 aa3.68□□□□□ -1.82
CDC9YDL164C YDL114WQ07530 308 aa3.68□□□□□ -1.82
CDC9YDL164C YOR376WQ08900 122 aa3.68□□□□□ -1.82
CDC9YDL164C YLR053CQ12026 108 aa3.68□□□□□ -1.82
CDC9YDL164C GDB1Q06625 1536 aa3.68□□□□□ -1.82
CDC9YDL164C YCR023CP25351 611 aa3.68□□□□□ -1.82
CDC9YDL164C FUN26P31381 517 aa3.68□□□□□ -1.82
CDC9YDL164C OAC1P32332 324 aa3.68□□□□□ -1.82
CDC9YDL164C CHS7P38843 316 aa3.68□□□□□ -1.82
CDC9YDL164C LCB3P47013 409 aa3.68□□□□□ -1.82
CDC9YDL164C UBC12P52491 188 aa3.68□□□□□ -1.82
CDC9YDL164C PIR3Q03180 325 aa3.68□□□□□ -1.82
CDC9YDL164C OSW1Q08692 278 aa3.68□□□□□ -1.82
CDC9YDL164C YAL064W-BO13512 126 aa3.67□□□□□ -1.82
CDC9YDL164C MRS1P07266 363 aa3.67□□□□□ -1.82
CDC9YDL164C MIX23P38162 196 aa3.67□□□□□ -1.82
CDC9YDL164C SHG1P38337 142 aa3.67□□□□□ -1.82
CDC9YDL164C MTC6P38849 526 aa3.67□□□□□ -1.82
CDC9YDL164C RSC9Q03124 581 aa3.67□□□□□ -1.82
CDC9YDL164C GMC1Q04399 608 aa3.67□□□□□ -1.82
CDC9YDL164C YPR127WQ06494 345 aa3.67□□□□□ -1.82
CDC9YDL164C FCY22Q12119 530 aa3.67□□□□□ -1.82
CDC9YDL164C YCR090CP25654 182 aaKnown RBP3.67□□□□□ -1.82
CDC9YDL164C HOT13P36078 116 aa3.67□□□□□ -1.82
CDC9YDL164C MRPL3P36516 390 aa3.67□□□□□ -1.82
CDC9YDL164C CYC2P38909 366 aa3.67□□□□□ -1.82
CDC9YDL164C YIL067CP40514 678 aa3.67□□□□□ -1.82
CDC9YDL164C CRZ1P53968 678 aa3.67□□□□□ -1.82
CDC9YDL164C HSK3P69852 69 aa3.67□□□□□ -1.82
CDC9YDL164C RRS1Q08746 203 aaKnown RBP3.67□□□□□ -1.82
CDC9YDL164C TIR4Q12218 487 aaPredicted RBP3.67□□□□□ -1.82
CDC9YDL164C RDI1Q12434 202 aa3.67□□□□□ -1.82
CDC9YDL164C TY3B-IQ7LHG5 1498 aaKnown RBP3.66□□□□□ -1.82
CDC9YDL164C PET54P10834 293 aa3.66□□□□□ -1.82
CDC9YDL164C ERD2P18414 219 aa3.66□□□□□ -1.82
CDC9YDL164C HEK2P38199 381 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
CDC9YDL164C ECM33P38248 429 aaKnown RBP3.66□□□□□ -1.82
CDC9YDL164C YNL046WP53956 172 aa3.66□□□□□ -1.82
CDC9YDL164C SFM1Q12314 213 aa3.66□□□□□ -1.82
CDC9YDL164C CDC28P00546 298 aaKnown RBP3.65□□□□□ -1.82
CDC9YDL164C HEM4P06174 275 aa3.65□□□□□ -1.82
CDC9YDL164C COS2P0CX12 379 aa3.65□□□□□ -1.82
CDC9YDL164C COS3P0CX13 379 aa3.65□□□□□ -1.82
CDC9YDL164C YFL068WP0CX99 160 aa3.65□□□□□ -1.82
CDC9YDL164C YLL066W-AP0CY00 160 aa3.65□□□□□ -1.82
CDC9YDL164C YLL067W-AP0CY01 160 aa3.65□□□□□ -1.82
CDC9YDL164C MCK1P21965 375 aaKnown RBP3.65□□□□□ -1.82
CDC9YDL164C MIR1P23641 311 aaKnown RBP3.65□□□□□ -1.82
CDC9YDL164C RPL16AP26784 199 aaKnown RBP3.65□□□□□ -1.82
CDC9YDL164C SEC1P30619 724 aaKnown RBP3.65□□□□□ -1.82
CDC9YDL164C NVJ1P38881 321 aa3.65□□□□□ -1.82
CDC9YDL164C SOK1P40317 901 aa3.65□□□□□ -1.82
CDC9YDL164C COS4P43542 379 aa3.65□□□□□ -1.82
CDC9YDL164C AVT1P47082 602 aa3.65□□□□□ -1.82
CDC9YDL164C SBH2P52871 88 aa3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms