RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W YDL009CQ12210 107 aa1.79□□□□□ -2.12
VPS8YAL002W SNU23Q12368 194 aaPredicted RBP1.79□□□□□ -2.12
VPS8YAL002W PUT1P09368 476 aa1.78□□□□□ -2.12
VPS8YAL002W CDC10P25342 322 aaKnown RBP1.78□□□□□ -2.12
VPS8YAL002W QRI5P32344 111 aa1.78□□□□□ -2.12
VPS8YAL002W KAR9P32526 644 aa1.78□□□□□ -2.12
VPS8YAL002W NAT2P37293 288 aa1.78□□□□□ -2.12
VPS8YAL002W DER1P38307 211 aa1.78□□□□□ -2.12
VPS8YAL002W PSA1P41940 361 aaKnown RBP1.78□□□□□ -2.12
VPS8YAL002W NBP1P52919 319 aaPredicted RBP1.78□□□□□ -2.12
VPS8YAL002W COS1P53822 381 aa1.78□□□□□ -2.12
VPS8YAL002W YNL095CP53932 642 aa1.78□□□□□ -2.12
VPS8YAL002W ECI1Q05871 280 aa1.78□□□□□ -2.12
VPS8YAL002W ARC18Q05933 178 aaKnown RBP1.78□□□□□ -2.12
VPS8YAL002W SFH1Q06168 426 aa1.78□□□□□ -2.12
VPS8YAL002W RDL2Q08742 149 aaKnown RBP1.78□□□□□ -2.12
VPS8YAL002W RSA1Q08932 381 aa1.78□□□□□ -2.12
VPS8YAL002W NOT5Q12514 560 aaPredicted RBP1.78□□□□□ -2.12
VPS8YAL002W YDR034W-BQ6Q5X2 51 aa1.78□□□□□ -2.12
VPS8YAL002W RPL28P02406 149 aaKnown RBP1.78□□□□□ -2.12
VPS8YAL002W YHK8P38776 514 aa1.78□□□□□ -2.12
VPS8YAL002W YNL320WP42840 284 aa1.78□□□□□ -2.12
VPS8YAL002W GWT1P47026 490 aa1.78□□□□□ -2.12
VPS8YAL002W OST3P48439 350 aa1.78□□□□□ -2.12
VPS8YAL002W IBD2P53892 351 aa1.78□□□□□ -2.12
VPS8YAL002W NRK1P53915 240 aa1.78□□□□□ -2.12
VPS8YAL002W ASI3P53983 676 aa1.78□□□□□ -2.12
VPS8YAL002W SNO1Q03144 224 aa1.78□□□□□ -2.12
VPS8YAL002W SPC24Q04477 213 aa1.78□□□□□ -2.12
VPS8YAL002W YEH2Q07950 538 aa1.78□□□□□ -2.12
VPS8YAL002W YAP7Q08182 245 aa1.78□□□□□ -2.12
VPS8YAL002W UTP23Q12339 254 aaKnown RBP1.78□□□□□ -2.12
VPS8YAL002W YPR064WQ12492 139 aa1.78□□□□□ -2.12
VPS8YAL002W PET20Q99373 253 aa1.78□□□□□ -2.12
VPS8YAL002W MET2P08465 486 aa1.78□□□□□ -2.13
VPS8YAL002W SPS100P13130 326 aa1.78□□□□□ -2.13
VPS8YAL002W CAP2P13517 287 aa1.78□□□□□ -2.13
VPS8YAL002W GCY1P14065 312 aaKnown RBP RIP-Chip data1.78□□□□□ -2.13not detected
VPS8YAL002W DRE2P36152 348 aa1.78□□□□□ -2.13
VPS8YAL002W VMA22P38784 181 aa1.78□□□□□ -2.13
VPS8YAL002W NDT80P38830 627 aa1.78□□□□□ -2.13
VPS8YAL002W COG3P40094 801 aa1.78□□□□□ -2.13
VPS8YAL002W YIL169CP40442 995 aa1.78□□□□□ -2.13
VPS8YAL002W YIL029CP40538 142 aa1.78□□□□□ -2.13
VPS8YAL002W QRI1P43123 477 aaKnown RBP1.78□□□□□ -2.13
VPS8YAL002W BRR6P53062 197 aa1.78□□□□□ -2.13
VPS8YAL002W MRM2P53123 320 aa1.78□□□□□ -2.13
VPS8YAL002W MMS2P53152 137 aa1.78□□□□□ -2.13
VPS8YAL002W COS6P53344 381 aa1.78□□□□□ -2.13
VPS8YAL002W HCH1P53834 153 aa1.78□□□□□ -2.13
VPS8YAL002W RIF2Q06208 395 aa1.78□□□□□ -2.13
VPS8YAL002W HNT3Q08702 217 aa1.78□□□□□ -2.13
VPS8YAL002W TIM18Q08749 192 aa1.78□□□□□ -2.13
VPS8YAL002W YLR050CQ12155 161 aaKnown RBP1.78□□□□□ -2.13
VPS8YAL002W PRM4Q12498 284 aa1.78□□□□□ -2.13
VPS8YAL002W SAL1D6W196 494 aa1.77□□□□□ -2.13
VPS8YAL002W REP1P03871 373 aa1.77□□□□□ -2.13
VPS8YAL002W RPS3P05750 240 aaKnown RBP1.77□□□□□ -2.13
VPS8YAL002W DPM1P14020 267 aaKnown RBP1.77□□□□□ -2.13
VPS8YAL002W EXG1P23776 448 aaKnown RBP1.77□□□□□ -2.13
VPS8YAL002W MGT1P26188 188 aa1.77□□□□□ -2.13
VPS8YAL002W PDC2P32896 925 aa1.77□□□□□ -2.13
VPS8YAL002W YBR241CP38142 488 aa1.77□□□□□ -2.13
VPS8YAL002W SDS24P38314 527 aa1.77□□□□□ -2.13
VPS8YAL002W SEO1P39709 593 aa1.77□□□□□ -2.13
VPS8YAL002W CIN5P40917 295 aa1.77□□□□□ -2.13
VPS8YAL002W TES1P41903 349 aaKnown RBP1.77□□□□□ -2.13
VPS8YAL002W MCM22P47167 239 aa1.77□□□□□ -2.13
VPS8YAL002W CDH1P53197 566 aa1.77□□□□□ -2.13
VPS8YAL002W NQM1P53228 333 aaPredicted RBP1.77□□□□□ -2.13
VPS8YAL002W MTM1P53320 366 aa1.77□□□□□ -2.13
VPS8YAL002W YNR066CP53752 436 aa1.77□□□□□ -2.13
VPS8YAL002W YNL040WP53960 456 aaPredicted RBP1.77□□□□□ -2.13
VPS8YAL002W ABF2Q02486 183 aa1.77□□□□□ -2.13
VPS8YAL002W DDC1Q08949 612 aa1.77□□□□□ -2.13
VPS8YAL002W RRP42Q12277 265 aaPredicted RBP1.77□□□□□ -2.13
VPS8YAL002W RAD5P32849 1169 aaPredicted RBP1.77□□□□□ -2.13
VPS8YAL002W TIP20P33891 701 aa1.77□□□□□ -2.13
VPS8YAL002W ANR2P36090 516 aaPredicted RBP1.77□□□□□ -2.13
VPS8YAL002W YBR096WP38256 230 aa1.77□□□□□ -2.13
VPS8YAL002W MST28P39552 234 aa1.77□□□□□ -2.13
VPS8YAL002W YJR054WP47114 497 aa1.77□□□□□ -2.13
VPS8YAL002W VHT1P53241 593 aa1.77□□□□□ -2.13
VPS8YAL002W ARK1P53974 638 aa1.77□□□□□ -2.13
VPS8YAL002W YLR152CP54072 576 aa1.77□□□□□ -2.13
VPS8YAL002W YMR181CQ03231 154 aa1.77□□□□□ -2.13
VPS8YAL002W YMR279CQ03263 540 aa1.77□□□□□ -2.13
VPS8YAL002W BCH1Q05029 724 aa1.77□□□□□ -2.13
VPS8YAL002W YPL150WQ12152 901 aa1.77□□□□□ -2.13
VPS8YAL002W TPO4Q12256 659 aa1.77□□□□□ -2.13
VPS8YAL002W RPN6Q12377 434 aa1.77□□□□□ -2.13
VPS8YAL002W RPL20AP0CX23 172 aaKnown RBP1.77□□□□□ -2.13
VPS8YAL002W RPL20BP0CX24 172 aaPredicted RBP1.77□□□□□ -2.13
VPS8YAL002W ASP3-2P0CX77 362 aa1.77□□□□□ -2.13
VPS8YAL002W ASP3-3P0CX78 362 aa1.77□□□□□ -2.13
VPS8YAL002W ASP3-4P0CX79 362 aa1.77□□□□□ -2.13
VPS8YAL002W ASP3-1P0CZ17 362 aa1.77□□□□□ -2.13
VPS8YAL002W IFM1P25038 676 aa1.77□□□□□ -2.13
VPS8YAL002W UBC8P28263 218 aa1.77□□□□□ -2.13
VPS8YAL002W SPT4P32914 102 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms