RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 JEN1P36035 616 aa5.92□□□□□ -1.46
NME1NME1 ARN2P38724 620 aa5.92□□□□□ -1.46
NME1NME1 GLG2P47011 380 aa5.92□□□□□ -1.46
NME1NME1 ATG17Q06410 417 aa5.92□□□□□ -1.46
NME1NME1 YPR195CQ06594 109 aa5.92□□□□□ -1.46
NME1NME1 HOM6P31116 359 aaKnown RBP5.91□□□□□ -1.46
NME1NME1 SRB4P32569 687 aa5.91□□□□□ -1.46
NME1NME1 MSN4P33749 630 aa5.91□□□□□ -1.46
NME1NME1 USE1P53146 245 aa5.91□□□□□ -1.46
NME1NME1 KRE28Q04431 385 aa5.91□□□□□ -1.46
NME1NME1 NUP157P40064 1391 aaKnown RBP5.91□□□□□ -1.46
NME1NME1 CFT1Q06632 1357 aaKnown RBP5.91□□□□□ -1.46
NME1NME1 PAN1P32521 1480 aa5.9□□□□□ -1.46
NME1NME1 YEL009C-AA0A023PZF2 135 aa5.9□□□□□ -1.46
NME1NME1 TKL2P33315 681 aa5.9□□□□□ -1.46
NME1NME1 ECM14P38836 430 aa5.9□□□□□ -1.46
NME1NME1 BUD13P46947 266 aaPredicted RBP5.9□□□□□ -1.46
NME1NME1 YPL039WQ03080 316 aa5.9□□□□□ -1.46
NME1NME1 PLB3Q08108 686 aa5.9□□□□□ -1.46
NME1NME1 RFM1Q12192 310 aa5.9□□□□□ -1.46
NME1NME1 AGA2P32781 87 aa5.89□□□□□ -1.47
NME1NME1 SPL2P38839 148 aa5.89□□□□□ -1.47
NME1NME1 SUR2P38992 349 aa5.89□□□□□ -1.47
NME1NME1 ALG9P53868 555 aaKnown RBP5.89□□□□□ -1.47
NME1NME1 AAH1P53909 347 aa5.89□□□□□ -1.47
NME1NME1 BMH1P29311 267 aaKnown RBP5.88□□□□□ -1.47
NME1NME1 IME2P32581 645 aa5.88□□□□□ -1.47
NME1NME1 RNH1Q04740 348 aa5.88□□□□□ -1.47
NME1NME1 YPR098CQ06089 161 aa5.88□□□□□ -1.47
NME1NME1 ISD11Q6Q560 94 aa5.88□□□□□ -1.47
NME1NME1 FZO1P38297 855 aa5.87□□□□□ -1.47
NME1NME1 CPR7P47103 393 aa5.87□□□□□ -1.47
NME1NME1 MIG2P53035 382 aa5.87□□□□□ -1.47
NME1NME1 YLR283WQ05867 314 aa5.87□□□□□ -1.47
NME1NME1 RUD3Q12234 484 aaKnown RBP5.87□□□□□ -1.47
NME1NME1 SNU23Q12368 194 aaPredicted RBP5.87□□□□□ -1.47
NME1NME1 PRM7Q12459 698 aa5.87□□□□□ -1.47
NME1NME1 MRX4Q12467 430 aa5.87□□□□□ -1.47
NME1NME1 COS2P0CX12 379 aa5.86□□□□□ -1.47
NME1NME1 COS3P0CX13 379 aa5.86□□□□□ -1.47
NME1NME1 RPS23AP0CX29 145 aaKnown RBP5.86□□□□□ -1.47
NME1NME1 RPS23BP0CX30 145 aa5.86□□□□□ -1.47
NME1NME1 NIF3P53081 288 aa5.86□□□□□ -1.47
NME1NME1 YMR166CQ03829 368 aa5.86□□□□□ -1.47
NME1NME1 MYO5Q04439 1219 aaKnown RBP5.86□□□□□ -1.47
NME1NME1 YCT1Q12235 531 aa5.86□□□□□ -1.47
NME1NME1 YPS3Q12303 508 aa5.86□□□□□ -1.47
NME1NME1 YER085CP40058 173 aa5.85□□□□□ -1.47
NME1NME1 TIM11P81449 96 aaPredicted RBP5.85□□□□□ -1.47
NME1NME1 YPR147CQ06522 304 aaKnown RBP5.85□□□□□ -1.47
NME1NME1 RRS1Q08746 203 aaKnown RBP5.85□□□□□ -1.47
NME1NME1 LDB7P38210 180 aa5.84□□□□□ -1.47
NME1NME1 YDR114CQ04597 100 aa5.84□□□□□ -1.47
NME1NME1 YOL019WQ08157 551 aa5.84□□□□□ -1.47
NME1NME1 YBL112CQ3E7Y4 105 aa5.84□□□□□ -1.47
NME1NME1 ZWF1P11412 505 aaKnown RBP5.83□□□□□ -1.48
NME1NME1 TCP1P12612 559 aaKnown RBP5.83□□□□□ -1.48
NME1NME1 SGE1P33335 543 aa5.83□□□□□ -1.48
NME1NME1 HOC1P47124 396 aa5.83□□□□□ -1.48
NME1NME1 OST3P48439 350 aa5.83□□□□□ -1.48
NME1NME1 TDH2P00358 332 aaKnown RBP5.82□□□□□ -1.48
NME1NME1 CTF19Q02732 369 aa5.82□□□□□ -1.48
NME1NME1 COQ10Q08058 207 aa5.82□□□□□ -1.48
NME1NME1 YKR104WP0CE69 306 aa5.81□□□□□ -1.48
NME1NME1 BFR1P38934 470 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
NME1NME1 YJR079WP47126 109 aa5.81□□□□□ -1.48
NME1NME1 JHD2P47156 728 aaPredicted RBP5.81□□□□□ -1.48
NME1NME1 RHO3Q00245 231 aaKnown RBP5.81□□□□□ -1.48
NME1NME1 EHD3P28817 500 aa5.8□□□□□ -1.48
NME1NME1 YBR096WP38256 230 aa5.8□□□□□ -1.48
NME1NME1 TCD1P38756 429 aa5.8□□□□□ -1.48
NME1NME1 TEM1P38987 245 aa5.8□□□□□ -1.48
NME1NME1 SNZ3P43545 298 aa5.8□□□□□ -1.48
NME1NME1 YJL028WP47062 111 aa5.8□□□□□ -1.48
NME1NME1 SMT3Q12306 101 aaKnown RBP5.8□□□□□ -1.48
NME1NME1 TIM22Q12328 207 aa5.8□□□□□ -1.48
NME1NME1 MATALPHA1P0CY06 175 aa5.79□□□□□ -1.48
NME1NME1 HMLALPHA1P0CY07 175 aa5.79□□□□□ -1.48
NME1NME1 SFC1P33303 322 aa5.79□□□□□ -1.48
NME1NME1 BMH2P34730 273 aaKnown RBP5.79□□□□□ -1.48
NME1NME1 GOS1P38736 223 aa5.79□□□□□ -1.48
NME1NME1 THO1P40040 218 aaKnown RBP5.79□□□□□ -1.48
NME1NME1 RRP40Q08285 240 aaKnown RBP5.79□□□□□ -1.48
NME1NME1 YBL008W-AQ3E821 79 aa5.79□□□□□ -1.48
NME1NME1 MRPL39P36533 70 aa5.78□□□□□ -1.48
NME1NME1 RTR1P40084 226 aaPredicted RBP5.78□□□□□ -1.48
NME1NME1 SPG4Q04438 115 aa5.78□□□□□ -1.48
NME1NME1 MRPL25P23369 157 aa5.77□□□□□ -1.49
NME1NME1 YDR124WQ04608 324 aa5.77□□□□□ -1.49
NME1NME1 SLD7Q08457 257 aa5.77□□□□□ -1.49
NME1NME1 PST1Q12355 444 aa5.77□□□□□ -1.49
NME1NME1 SNZ2P53824 298 aa5.76□□□□□ -1.49
NME1NME1 GOT1Q03554 138 aa5.76□□□□□ -1.49
NME1NME1 DPB2P24482 689 aaPredicted RBP5.75□□□□□ -1.49
NME1NME1 RPS5P26783 225 aaKnown RBP5.75□□□□□ -1.49
NME1NME1 CAB3P36076 571 aa5.75□□□□□ -1.49
NME1NME1 MAL32P38158 584 aa5.75□□□□□ -1.49
NME1NME1 SSH1P38353 490 aaKnown RBP5.75□□□□□ -1.49
NME1NME1 MRH4P53166 561 aa5.75□□□□□ -1.49
NME1NME1 MAL12P53341 584 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms