RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 NECAB3Q96P71 396 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 CDT1Q9H211 546 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 CXCL16Q9H2A7 254 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 PARVGQ9HBI0 331 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 CLEC1BQ9P126 229 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 GDAQ9Y2T3 454 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 PRG3Q9Y2Y8 225 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 IRAK3Q9Y616 596 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 PDCD11Q14690 1871 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 A0A087X0B3 334 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 F8W810 466 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 H0YCG3 227 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 TRAK2O60296 914 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 NR1I2O75469 434 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 BRD1O95696 1058 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 EFEMP2O95967 443 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 KRT18P05783 430 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 THP07101 528 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 IL9P15248 144 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 GRM5P41594 1212 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 STRN3Q13033 797 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 BMS1Q14692 1282 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 NAB2Q15742 525 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 CLUL1Q15846 466 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 PUS10Q3MIT2 529 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 FOXD4L6Q3SYB3 417 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 FOXD4L3Q6VB84 417 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 TMEM184AQ6ZMB5 413 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 HAUS6Q7Z4H7 955 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 APBB1IPQ7Z5R6 666 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 ZBTB33Q86T24 672 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 MYCT1Q8N699 235 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 AUTS2Q8WXX7 1259 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 ZBTB45Q96K62 511 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 FIZ1Q96SL8 496 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 COLEC11Q9BWP8 271 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 PANK2Q9BZ23 570 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 STK39Q9UEW8 545 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 CD207Q9UJ71 328 aa11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-220ENST00000581835 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 MYMKA6NI61 221 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 MBTPS2O43462 519 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 CUTAO60888 179 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 LILRB3O75022 631 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 CLASP2O75122 1294 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 TBCAO75347 108 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 TOM1L1O75674 476 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 SOD2P04179 222 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 MCF2P10911 925 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 SCP2P22307 547 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 CA8P35219 290 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 STAT6P42226 847 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 COASYQ13057 564 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 TUSC3Q13454 348 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 PTPN14Q15678 1187 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 ATL3Q6DD88 541 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 ALKAL1Q6UXT8 129 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 ZPBP2Q6X784 338 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 SV2BQ7L1I2 683 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 DYMQ7RTS9 669 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 TAS1R1Q7RTX1 841 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 FAM178BQ8IXR5 827 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 PDILTQ8N807 584 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 RABGGTAQ92696 567 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 DDX12PQ92771 950 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 PAAF1Q9BRP4 392 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 TCHPQ9BT92 498 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 ZHX3Q9H4I2 956 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 CACNG4Q9UBN1 327 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 HCFC2Q9Y5Z7 792 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 VWA8A3KMH1 1905 aa11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 MTCL1Q9Y4B5 1905 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-220ENST00000581835 K7ENM7 598 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 OSTNP61366 133 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 DNM1Q05193 864 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 MCL1Q07820 350 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 SMAD4Q13485 552 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 NOLC1Q14978 699 aaKnown RBP eCLIP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 SMAD2Q15796 467 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 XKR4Q5GH76 650 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 AXDND1Q5T1B0 1012 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 LLGL2Q6P1M3 1020 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 SHC4Q6S5L8 630 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 SMRP1Q8NCR6 262 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 KCNG4Q8TDN1 519 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 PPP1R10Q96QC0 940 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 HERC2P3Q9BVR0 1158 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 GPR62Q9BZJ7 368 aa11.24□□□□□ -0.61
PPP4R1-220ENST00000581835 HAPLN2Q9GZV7 340 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms