RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 NAB2Q15742 525 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 OLFML2BQ68BL8 750 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 IFNLR1Q8IU57 520 aaPredicted RBP30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 RHPN2Q8IUC4 686 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 ARHGEF19Q8IW93 802 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 TRIM58Q8NG06 486 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 OR6J1Q8NGC5 347 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 SEMA4DQ92854 862 aa30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 ACO2Q99798 780 aaKnown RBP30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 TUT1Q9H6E5 874 aaKnown RBP30.76■■■□□ 2.52
CTDNEP1-210ENST00000574322 BTNL10A8MVZ5 291 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 ZC3H11AO75152 810 aaKnown RBP eCLIP30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 PRKCBP05771 671 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 PRMT2P55345 433 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 TNFAIP2Q03169 654 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 DGKDQ16760 1214 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 OLIG1Q8TAK6 271 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 RAB20Q9NX57 234 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 NAGPAQ9UK23 515 aa30.76■■■□□ 2.51
CTDNEP1-210ENST00000574322 KLRC1P26715 233 aa30.75■■■□□ 2.51
CTDNEP1-210ENST00000574322 PAPD7Q5XG87 772 aaKnown RBP30.75■■■□□ 2.51
CTDNEP1-210ENST00000574322 SLC30A5Q8TAD4 765 aa30.75■■■□□ 2.51
CTDNEP1-210ENST00000574322 TOPORSQ9NS56 1045 aaPredicted RBP30.75■■■□□ 2.51
CTDNEP1-210ENST00000574322 GNEQ9Y223 722 aaKnown RBP30.75■■■□□ 2.51
CTDNEP1-210ENST00000574322 CASP8AP2Q9UKL3 1982 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 FOXN3O00409 490 aaPredicted RBP30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 ACKR2O00590 384 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 ABLIM1O14639 778 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 CLDN3O15551 220 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 ADCY6O43306 1168 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 FAM189A1O60320 539 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 LRRN2O75325 713 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 ZNF286BP0CG31 522 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 DLATP10515 647 aaKnown RBP30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 ENOX2Q16206 610 aaKnown RBP30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 RAET1EQ8TD07 263 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 TSC1Q92574 1164 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 ZNF516Q92618 1163 aa30.74■■■□□ 2.51
CTDNEP1-210ENST00000574322 MACROD2A1Z1Q3 448 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 A6NJR5 290 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 TACC1O75410 805 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 ZNF865P0CJ78 1059 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 PNMA6AP0CW24 399 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 PROZP22891 400 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 ACOT2P49753 483 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 CLCN3P51790 818 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 MCL1Q07820 350 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 ZACNQ401N2 412 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 TSHZ1Q6ZSZ6 1077 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 METTL13Q8N6R0 699 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 TAS1R2Q8TE23 839 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 FNBP1Q96RU3 617 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 RBAKQ9NYW8 714 aaPredicted RBP30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 FLRT1Q9NZU1 646 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 ANKFY1Q9P2R3 1169 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 INTUQ9ULD6 942 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 EVPLQ92817 2033 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 NCBP1Q09161 790 aaKnown RBP30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 ARHGAP44Q17R89 818 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 HELQQ8TDG4 1101 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 FAM81BQ96LP2 452 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 CARD6Q9BX69 1037 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 PTPRHQ9HD43 1115 aa30.73■■■□□ 2.51
CTDNEP1-210ENST00000574322 CNTNAP2Q9UHC6 1331 aa30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 TTLL13PA6NNM8 815 aa30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 DDX3XO00571 662 aaKnown RBP eCLIP30.72■■■□□ 2.512e-12■■■□□ 15.7
CTDNEP1-210ENST00000574322 C4BPAP04003 597 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 MFAP3P55082 362 aa30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 FAM187BQ17R55 369 aa30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 ALKBH5Q6P6C2 394 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 CTU1Q7Z7A3 348 aaKnown RBP30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 NT5C1BQ96P26 610 aa30.72■■■□□ 2.51
CTDNEP1-210ENST00000574322 MBTD1Q05BQ5 628 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 CCL14Q16627 93 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 MTHFD1LQ6UB35 978 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 TRAPPC11Q7Z392 1133 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 FAM71AQ8IYT1 594 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 MNS1Q8NEH6 495 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 ANKRD7Q92527 254 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 SHC3Q92529 594 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 SALL4Q9UJQ4 1053 aa30.71■■■□□ 2.51
CTDNEP1-210ENST00000574322 EFCAB8A8MWE9 144 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 TMOD1P28289 359 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 MATR3P43243 847 aaKnown RBP eCLIP30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 PRPF4BQ13523 1007 aaKnown RBP30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 KIAA0753Q2KHM9 967 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 BRSK2Q8IWQ3 736 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 KREMEN1Q96MU8 473 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 NOX5Q96PH1 765 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 CGRRF1Q99675 332 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 IFT122Q9HBG6 1241 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 PDE11AQ9HCR9 933 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 JRKLQ9Y4A0 524 aa30.7■■■□□ 2.51
CTDNEP1-210ENST00000574322 OGTO15294 1046 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 TADA3O75528 432 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 WNT7BP56706 349 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 IGBP1P78318 339 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 GCNT1Q02742 428 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 WHAMMP3Q1A5X7 153 aa30.7■■■□□ 2.5
CTDNEP1-210ENST00000574322 ZBTB41Q5SVQ8 909 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms