RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 CDK7P50613 346 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 PPP3CAQ08209 521 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 SNX17Q15036 470 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 TRMT1LQ7Z2T5 733 aaKnown RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 FBXL13Q8NEE6 735 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 UBE2Q2Q8WVN8 375 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 LENG1Q96BZ8 264 aaPredicted RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 BICD1Q96G01 975 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 CGRRF1Q99675 332 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 MSTO1Q9BUK6 570 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 CELF4Q9BZC1 486 aaKnown RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 CDT1Q9H211 546 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 IKZF4Q9H2S9 585 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 AGPAT5Q9NUQ2 364 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 ZNHIT6Q9NWK9 470 aaKnown RBP11.81□□□□□ -0.52
PABPN1-203ENST00000553960 APEX2Q9UBZ4 518 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 AKT3Q9Y243 479 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 C2CD2Q9Y426 696 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 CITO14578 2027 aa11.81□□□□□ -0.52
PABPN1-203ENST00000553960 INO80B-WBP1J3KQ70 363 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 RNF225M0QZC1 329 aaPredicted RBP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CAPN15O75808 1086 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CCDC172P0C7W6 258 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 MXI1P50539 228 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 MRPS6P82932 125 aaKnown RBP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 MYL7Q01449 175 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 MGAT3Q09327 533 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 TRIM71Q2Q1W2 868 aaKnown RBP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 ASTE1Q2TB18 679 aaPredicted RBP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CBWD6Q4V339 395 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CBWD3Q5JTY5 395 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CBWD5Q5RIA9 395 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 NOTUMQ6P988 496 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 PDXDC1Q6P996 788 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 RSPH1Q8WYR4 309 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 ARMC5Q96C12 935 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 NLRP4Q96MN2 994 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 SENP6Q9GZR1 1112 aaPredicted RBP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.8□□□□□ -0.52
PABPN1-203ENST00000553960 PDZD7Q9H5P4 517 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 GCNT4Q9P109 453 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 PTCH2Q9Y6C5 1203 aa11.8□□□□□ -0.52
PABPN1-203ENST00000553960 TTLL13PA6NNM8 815 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 KIF2AO00139 706 aaPredicted RBP11.79□□□□□ -0.52
PABPN1-203ENST00000553960 ZNF623O75123 536 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 PARNO95453 639 aaKnown RBP11.79□□□□□ -0.52
PABPN1-203ENST00000553960 VTNP04004 478 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 IGBP1P78318 339 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 LRMPQ12912 555 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 HGSNATQ68CP4 663 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 GDF6Q6KF10 455 aaPredicted RBP11.79□□□□□ -0.52
PABPN1-203ENST00000553960 SLC27A1Q6PCB7 646 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 ALKAL1Q6UXT8 129 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 RUFY4Q6ZNE9 571 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 ANKLE1Q8NAG6 615 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 ZBTB45Q96K62 511 aaPredicted RBP11.79□□□□□ -0.52
PABPN1-203ENST00000553960 ADPGKQ9BRR6 497 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 FAM213AQ9BRX8 229 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 SYT11Q9BT88 431 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 PCIF1Q9H4Z3 704 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 MMRN2Q9H8L6 949 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 RBAKQ9NYW8 714 aaPredicted RBP11.79□□□□□ -0.52
PABPN1-203ENST00000553960 TRIM17Q9Y577 477 aa11.79□□□□□ -0.52
PABPN1-203ENST00000553960 A0A0U1RQG5 324 aaPredicted RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 EIF3CLB5ME19 914 aaKnown RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 EPHB6O15197 1021 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 INPPL1O15357 1258 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 ERLIN2O94905 339 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 GJB1P08034 283 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 SLC9A1P19634 815 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 PAX3P23760 479 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 MSNP26038 577 aaKnown RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 DLG4P78352 724 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 IRX5P78411 483 aaPredicted RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 ZBTB6Q15916 424 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 ENOX2Q16206 610 aaKnown RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 DUOXA2Q1HG44 320 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 ZNF568Q3ZCX4 644 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 DCAF17Q5H9S7 520 aaPredicted RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 C10orf76Q5T2E6 689 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 TCERG1LQ5VWI1 586 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 E4F1Q66K89 784 aaPredicted RBP11.78□□□□□ -0.52
PABPN1-203ENST00000553960 IRF2BP2Q7Z5L9 587 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 ZSWIM2Q8NEG5 633 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 CXorf38Q8TB03 319 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 CAGE1Q8TC20 777 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 DNAJB3Q8WWF6 145 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
PABPN1-203ENST00000553960 SHC3Q92529 594 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms