RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 MED23Q9ULK4 1368 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 DDX60LQ5H9U9 1706 aaKnown RBP6.16□□□□□ -1.42
SCAF11-214ENST00000550893 MAST2Q6P0Q8 1798 aa6.16□□□□□ -1.42
SCAF11-214ENST00000550893 PTPRFP10586 1907 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 CCDC163A0A0D9SF12 145 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 PPIP5K2O43314 1243 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 BBOX1O75936 387 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 KLHL18O94889 574 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 FBXO21O94952 628 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 KNG1P01042 644 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 ITGB3P05106 788 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 NBPF7P0C2Y1 421 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 RFX5P48382 616 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 GMPSP49915 693 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 LACTBP83111 547 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 DBPQ10586 325 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 NFATC3Q12968 1075 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 RABL6Q3YEC7 729 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 EP400NLQ6ZTU2 488 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 CISD2Q8N5K1 135 aaKnown RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 NUDT10Q8NFP7 164 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 LINS1Q8NG48 757 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 IGDCC4Q8TDY8 1250 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 SUCLG2Q96I99 432 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 RBM15Q96T37 977 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 MRPL4Q9BYD3 311 aaKnown RBP6.15□□□□□ -1.42
SCAF11-214ENST00000550893 KRTAP17-1Q9BYP8 105 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 DBNDD1Q9H9R9 158 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 KCND1Q9NSA2 647 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 GPRC5DQ9NZD1 345 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 SFMBT1Q9UHJ3 866 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 PGAP2Q9UHJ9 254 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 COQ6Q9Y2Z9 468 aa6.15□□□□□ -1.42
SCAF11-214ENST00000550893 ZSWIM8A7E2V4 1837 aa6.15□□□□□ -1.43
SCAF11-214ENST00000550893 PHIPQ8WWQ0 1821 aa6.15□□□□□ -1.43
SCAF11-214ENST00000550893 CNTNAP1P78357 1384 aa6.15□□□□□ -1.43
SCAF11-214ENST00000550893 TRAF5O00463 557 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 PSMD14O00487 310 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 RAD17O75943 681 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 PLATP00750 562 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 CHGBP05060 677 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 EPHX2P34913 555 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 GJA4P35212 333 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 RPS8P62241 208 aaKnown RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 EFEMP1Q12805 493 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 CST9Q5W186 159 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 PKN3Q6P5Z2 889 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 DPP8Q6V1X1 898 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 DDX46Q7L014 1031 aaKnown RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 BRAPQ7Z569 592 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 FGD2Q7Z6J4 655 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 NPM2Q86SE8 214 aaKnown RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 KLHL36Q8N4N3 616 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 CERS5Q8N5B7 392 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 SMC1BQ8NDV3 1235 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 ZBED3Q96IU2 234 aaPredicted RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 TACO1Q9BSH4 297 aaKnown RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 MXD3Q9BW11 206 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 NCOA5Q9HCD5 579 aaKnown RBP6.14□□□□□ -1.43
SCAF11-214ENST00000550893 ZDHHC9Q9Y397 364 aa6.14□□□□□ -1.43
SCAF11-214ENST00000550893 K7ESM1 405 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 GRM8O00222 908 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 NPHP1O15259 732 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 ECE2O60344 883 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 C4BPAP04003 597 aaKnown RBP6.13□□□□□ -1.43
SCAF11-214ENST00000550893 DACT2Q5SW24 774 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 KBTBD2Q8IY47 623 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 DRC1Q96MC2 740 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 PUS3Q9BZE2 481 aaKnown RBP6.13□□□□□ -1.43
SCAF11-214ENST00000550893 USP44Q9H0E7 712 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 BARX1Q9HBU1 254 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-214ENST00000550893 HACL1Q9UJ83 578 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 CNOT11Q9UKZ1 510 aaKnown RBP6.13□□□□□ -1.43
SCAF11-214ENST00000550893 PCDHAC2Q9Y5I4 1007 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 ZNF536O15090 1300 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 MYH2Q9UKX2 1941 aa6.13□□□□□ -1.43
SCAF11-214ENST00000550893 TCRBV16S1A1N1A0A5B0 115 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 CLASP2O75122 1294 aaKnown RBP6.12□□□□□ -1.43
SCAF11-214ENST00000550893 UFL1O94874 794 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 APPP05067 770 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 VIL1P09327 827 aaKnown RBP6.12□□□□□ -1.43
SCAF11-214ENST00000550893 XDHP47989 1333 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 RARSP54136 660 aaKnown RBP6.12□□□□□ -1.43
SCAF11-214ENST00000550893 ZNF280AP59817 542 aaPredicted RBP6.12□□□□□ -1.43
SCAF11-214ENST00000550893 KRTAP10-2P60368 255 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 SQSTM1Q13501 440 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 SEC23AQ15436 765 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 SPATS1Q496A3 300 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 CPZQ66K79 652 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 ABHD17CQ6PCB6 329 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 HHIPL2Q6UWX4 724 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 Q6ZUG5 572 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 OVCH1Q7RTY7 1134 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 NIM1KQ8IY84 436 aa6.12□□□□□ -1.43
SCAF11-214ENST00000550893 STK31Q9BXU1 1019 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms