RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PCDHB4Q9Y5E5 795 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 CFHP08603 1231 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 RARAP10276 462 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 SCP2P22307 547 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 FAM133BQ5BKY9 247 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 RHOT2Q8IXI1 618 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 MSL3Q8N5Y2 521 aaKnown RBP14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 FBXL13Q8NEE6 735 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 ATP8B4Q8TF62 1192 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 ZBTB10Q96DT7 871 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 IFT74Q96LB3 600 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 PSMD1Q99460 953 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 DEFB129Q9H1M3 183 aa14.65□□□□□ -0.06
PRPF40B-209ENST00000548825 GOLGA8SH3BPF8 625 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 GOLGA8MH3BSY2 632 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ZBTB41Q5SVQ8 909 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 KDM7AQ6ZMT4 941 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 MICALL2Q8IY33 904 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 EFCAB13Q8IY85 973 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ZDHHC14Q8IZN3 488 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 CLEC4DQ8WXI8 215 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 RAPGEF5Q92565 580 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 KAT2BQ92831 832 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 CYFIP2Q96F07 1278 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 C9orf72Q96LT7 481 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ELAC2Q9BQ52 826 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ZSWIM1Q9BR11 485 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 POLR3FQ9H1D9 316 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 SLITRK6Q9H5Y7 841 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 CHST7Q9NS84 486 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 A0A087WUV0 522 aaPredicted RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 GMNCA6NCL1 334 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 PIK3R2O00459 728 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 DHX15O43143 795 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 CHN1P15882 459 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 RXRBP28702 533 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 NSFP46459 744 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 MTMR3Q13615 1198 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ATP13A4Q4VNC1 1196 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ANKRD35Q8N283 1001 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 GPATCH11Q8N954 259 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 IPO4Q8TEX9 1081 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 TARS2Q9BW92 718 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 C10orf88Q9H8K7 445 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 COL24A1Q17RW2 1714 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 CNTNAP1P78357 1384 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 GTPBP10A4D1E9 387 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 MMP14P50281 582 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 SCARA3Q6AZY7 606 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 ZC3H3Q8IXZ2 948 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 KIFAP3Q92845 792 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 PRMT1Q99873 361 aaKnown RBP14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 EXOC7Q9UPT5 735 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 GINS2Q9Y248 185 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 PCDHA10Q9Y5I2 948 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
PRPF40B-209ENST00000548825 THAP12O43422 761 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 ZNF862O60290 1169 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 RTN2O75298 545 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 KRT19P08727 400 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 KRT10P13645 584 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 PRKCEQ02156 737 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 KRT17Q04695 432 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 STRN3Q13033 797 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 KYNUQ16719 465 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 TMEM130Q8N3G9 435 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 DEPTORQ8TB45 409 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 PARD3BQ8TEW8 1205 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CALR3Q96L12 384 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CARD9Q9H257 536 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 TAOK3Q9H2K8 898 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 DMAC2Q9NW81 257 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 TMEM59LQ9UK28 342 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CREB1P16220 341 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 GTF2A1P52655 376 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 ZNF131P52739 623 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 RWDD2BP57060 319 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 PTENP60484 403 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 FMO1Q01740 532 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 ACTN3Q08043 901 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CCDC60Q8IWA6 550 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 INTS9Q9NV88 658 aaKnown RBP14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 STXBP5LQ9Y2K9 1186 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 ADGRA3Q8IWK6 1321 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 SHOX2O60902 331 aaPredicted RBP14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 ECEL1O95672 775 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CD19P15391 556 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CHRNB2P17787 502 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 CNTN2Q02246 1040 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 FSTL1Q12841 308 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 C1orf220Q5T0J3 134 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 MICALCLQ6ZW33 695 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 LMO3Q8TAP4 145 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 PXMP2Q9NR77 195 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 HACL1Q9UJ83 578 aa14.63□□□□□ -0.07
PRPF40B-209ENST00000548825 NLRP11P59045 1033 aaKnown RBP14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 MMS22LQ6ZRQ5 1243 aa14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 PNMA8AQ86V59 439 aaPredicted RBP14.62□□□□□ -0.07
PRPF40B-209ENST00000548825 RTKN2Q8IZC4 609 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms