RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 ANKRD53Q8N9V6 530 aa7.99□□□□□ -1.13
LEMD3-206ENST00000545026 VRK1Q99986 396 aaPredicted RBP7.99□□□□□ -1.13
LEMD3-206ENST00000545026 NAA15Q9BXJ9 866 aaKnown RBP7.99□□□□□ -1.13
LEMD3-206ENST00000545026 PCDHA3Q9Y5H8 950 aa7.99□□□□□ -1.13
LEMD3-206ENST00000545026 NPIPB6E9PJ23 425 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 ARHGAP6O43182 974 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 DDCP20711 480 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 CACNB3P54284 484 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 RAB1AP62820 205 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 MTM1Q13496 603 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 RNF151Q2KHN1 245 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 VMACQ2NL98 169 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 CCDC157Q569K6 752 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 RNF220Q5VTB9 566 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 MAEAQ7L5Y9 396 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 HEATR3Q7Z4Q2 680 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 RPL10LQ96L21 214 aaKnown RBP7.98□□□□□ -1.13
LEMD3-206ENST00000545026 NT5C1BQ96P26 610 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 STRBPQ96SI9 672 aaKnown RBP7.98□□□□□ -1.13
LEMD3-206ENST00000545026 GPHA2Q96T91 129 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 SLC38A3Q99624 504 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 SENP6Q9GZR1 1112 aaPredicted RBP7.98□□□□□ -1.13
LEMD3-206ENST00000545026 ENKD1Q9H0I2 346 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 LMBRD1Q9NUN5 540 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 AJAP1Q9UKB5 411 aaPredicted RBP7.98□□□□□ -1.13
LEMD3-206ENST00000545026 PCDHGB6Q9Y5F9 930 aa7.98□□□□□ -1.13
LEMD3-206ENST00000545026 MROH6A6NGR9 719 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 GOLIM4O00461 696 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 GPR32O75388 356 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 ARIH2O95376 493 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 IFIT2P09913 472 aaKnown RBP7.97□□□□□ -1.13
LEMD3-206ENST00000545026 MALP21145 153 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 PCSK1P29120 753 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 CASRP41180 1078 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 ZNF280AP59817 542 aaPredicted RBP7.97□□□□□ -1.13
LEMD3-206ENST00000545026 GPSM2P81274 684 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 SNAPC2Q13487 334 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 PRAMEF14Q5SWL7 426 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 KRT40Q6A162 431 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 OGFOD2Q6N063 350 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 KBTBD2Q8IY47 623 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 FBXO18Q8NFZ0 1043 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 CASKIN2Q8WXE0 1202 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 STON2Q8WXE9 905 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 CFHR4Q92496 578 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 PSMD1Q99460 953 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 ARMT1Q9H993 441 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 ATP6V0A4Q9HBG4 840 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 PHTF1Q9UMS5 762 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 RIPOR2Q9Y4F9 1068 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 COMMD10Q9Y6G5 202 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
LEMD3-206ENST00000545026 NRP1O14786 923 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 TYRP14679 529 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 FPR1P21462 350 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 PEX2P28328 305 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 PTPN7P35236 360 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 OS9Q13438 667 aaPredicted RBP7.96□□□□□ -1.14
LEMD3-206ENST00000545026 PLS1Q14651 629 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 GADL1Q6ZQY3 521 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 ZNF572Q7Z3I7 529 aaPredicted RBP7.96□□□□□ -1.14
LEMD3-206ENST00000545026 TMEM151BQ8IW70 566 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 POU5F2Q8N7G0 328 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 MDM1Q8TC05 714 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 SLC35A4Q96G79 324 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 FAM167AQ96KS9 214 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 TMEM140Q9NV12 185 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 ABCF2Q9UG63 623 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 NR2E1Q9Y466 385 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 RNF114Q9Y508 228 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 SLC4A7Q9Y6M7 1214 aa7.96□□□□□ -1.14
LEMD3-206ENST00000545026 NT5C1B-RDH14C9J2C7 533 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 H3BUI4 141 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 PQBP1O60828 265 aaKnown RBP7.95□□□□□ -1.14
LEMD3-206ENST00000545026 ALOX15P16050 662 aaPredicted RBP7.95□□□□□ -1.14
LEMD3-206ENST00000545026 SLURP1P55000 103 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 CTXN1P60606 82 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 SAFB2Q14151 953 aaKnown RBP eCLIP7.95□□□□□ -1.14
LEMD3-206ENST00000545026 FGL2Q14314 439 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 APOA5Q6Q788 366 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 ADGRE4PQ86SQ3 457 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 CMTM4Q8IZR5 234 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 LRTOMTQ8WZ04 291 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 RABGGTAQ92696 567 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 CDC5LQ99459 802 aaKnown RBP7.95□□□□□ -1.14
LEMD3-206ENST00000545026 C22orf23Q9BZE7 217 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 ZMAT3Q9HA38 289 aaKnown RBP7.95□□□□□ -1.14
LEMD3-206ENST00000545026 KLHL11Q9NVR0 708 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 PNPOQ9NVS9 261 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 ACTL7AQ9Y615 435 aa7.95□□□□□ -1.14
LEMD3-206ENST00000545026 PMS2P1A4D2B8 440 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 CFAP69A5D8W1 941 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 MATN2O00339 956 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 MYL3P08590 195 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 IL2RBP14784 551 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 RAP1GAPP47736 663 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 GJA9P57773 515 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 SP140Q13342 867 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 KRT78Q8N1N4 520 aa7.94□□□□□ -1.14
LEMD3-206ENST00000545026 SH2D3CQ8N5H7 860 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms