RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 KRI1Q8N9T8 703 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 LINC00301Q8NCQ3 95 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 CLIC6Q96NY7 704 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 RPS6KC1Q96S38 1066 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 TARS2Q9BW92 718 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 KLK14Q9P0G3 267 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 CCDC39Q9UFE4 941 aa18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 BARX2Q9UMQ3 279 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-205ENST00000537164 SOD2P04179 222 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 SRGAP2BP0DMP2 458 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 GRM5P41594 1212 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 OR1G1P47890 313 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 TUSC3Q13454 348 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 PTPN14Q15678 1187 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 XKR4Q5GH76 650 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 ZPBP2Q6X784 338 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 GPR65Q8IYL9 337 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 RASSF8Q8NHQ8 419 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 CDT1Q9H211 546 aa18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 PRG3Q9Y2Y8 225 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-205ENST00000537164 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 C19orf67A6NJJ6 358 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 CLASP2O75122 1294 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 PPP6R2O75170 966 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 TOM1L1O75674 476 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 THP07101 528 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 HSP90AA1P07900 732 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 ZSCAN22P10073 491 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 MCF2P10911 925 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 HOXB8P17481 243 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 CACNB1Q02641 598 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 STRN3Q13033 797 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 PDCD11Q14690 1871 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 CLUL1Q15846 466 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 MPZL3Q6UWV2 235 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 ALKAL1Q6UXT8 129 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 ZNF396Q96N95 335 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 FIZ1Q96SL8 496 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 HERC2P3Q9BVR0 1158 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 COLEC11Q9BWP8 271 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 CXCL16Q9H2A7 254 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 PARVGQ9HBI0 331 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 CD320Q9NPF0 282 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 CHST7Q9NS84 486 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 HCFC2Q9Y5Z7 792 aa18.87■□□□□ 0.61
SFSWAP-205ENST00000537164 YEATS4O95619 227 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 TXLNAP40222 546 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 ZP2Q05996 745 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 DHX8Q14562 1220 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 ANKRD54Q6NXT1 300 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 HAUS6Q7Z4H7 955 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 ADHFE1Q8IWW8 467 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 AUTS2Q8WXX7 1259 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 SUSD6Q92537 303 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 CASP10Q92851 521 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 PPP1R10Q96QC0 940 aaKnown RBP18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 S1PR5Q9H228 398 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 ADAM28Q9UKQ2 775 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 SSX2IPQ9Y2D8 614 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 GDAQ9Y2T3 454 aa18.86■□□□□ 0.61
SFSWAP-205ENST00000537164 F8W810 466 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 SPTLC2O15270 562 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 F13A1P00488 732 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 PIGRP01833 764 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 ABCD1P33897 745 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 DSG1Q02413 1049 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 STK38Q15208 465 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 KIAA0319Q5VV43 1072 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 RRAGBQ5VZM2 374 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 ATL3Q6DD88 541 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 SYCE2Q6PIF2 218 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 TAS1R1Q7RTX1 841 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 PPFIBP1Q86W92 1011 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 GJD3Q8N144 294 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 CEP120Q8N960 986 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 SLC22A17Q8WUG5 538 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 CCDC94Q9BW85 323 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 ST6GALNAC4Q9H4F1 302 aa18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 MRPL17Q9NRX2 175 aaKnown RBP18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 TOPORSQ9NS56 1045 aaPredicted RBP18.85■□□□□ 0.61
SFSWAP-205ENST00000537164 TRAK2O60296 914 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 FAM13AO94988 1023 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 C1RP00736 705 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 MCL1Q07820 350 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 HSP90AA2PQ14568 343 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 FUT10Q6P4F1 479 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 CCDC73Q6ZRK6 1079 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 MYCT1Q8N699 235 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 ZBTB45Q96K62 511 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 KLHL5Q96PQ7 755 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 PAAF1Q9BRP4 392 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 EMILIN2Q9BXX0 1053 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 GPR62Q9BZJ7 368 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 RXFP1Q9HBX9 757 aa18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 TFIP11Q9UBB9 837 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 USP15Q9Y4E8 981 aaPredicted RBP18.84■□□□□ 0.61
SFSWAP-205ENST00000537164 MTCL1Q9Y4B5 1905 aaKnown RBP18.83■□□□□ 0.6
SFSWAP-205ENST00000537164 A0A087X0B3 334 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms