RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SSX2IPQ9Y2D8 614 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 GDAQ9Y2T3 454 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 SLC16A4O15374 487 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 URODP06132 367 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 THP07101 528 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 KIAA0319Q5VV43 1072 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 LRRC15Q8TF66 581 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 SNX21Q969T3 373 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 TARS2Q9BW92 718 aaKnown RBP25.32■■□□□ 1.64
CLDND1-230ENST00000514537 ADAM7Q9H2U9 754 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 CHST7Q9NS84 486 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 MTMR6Q9Y217 621 aa25.32■■□□□ 1.64
CLDND1-230ENST00000514537 NPHP3-ACAD11A0A0J9YXS1 232 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 DCXO43602 365 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 KLRC2P26717 231 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 ITIH3Q06033 890 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 NAB2Q15742 525 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 FAM173BQ6P4H8 233 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 RNF135Q8IUD6 432 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 TMEM161BQ8NDZ6 487 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 RABGGTAQ92696 567 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 PAAF1Q9BRP4 392 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 GPR62Q9BZJ7 368 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 C11orf16Q9NQ32 467 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 FOXD4L1Q9NU39 408 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 BLOC1S4Q9NUP1 217 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 DZANK1Q9NVP4 752 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 ADAM28Q9UKQ2 775 aa25.31■■□□□ 1.64
CLDND1-230ENST00000514537 C2CD2LO14523 706 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 GPR37L1O60883 481 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 PROZP22891 400 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 GLUD2P49448 558 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 CLCN4P51793 760 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 SMTNP53814 917 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 DSG1Q02413 1049 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 HSP90AA2PQ14568 343 aaPredicted RBP25.3■■□□□ 1.64
CLDND1-230ENST00000514537 KARSQ15046 597 aaKnown RBP25.3■■□□□ 1.64
CLDND1-230ENST00000514537 FUT10Q6P4F1 479 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 CCSER1Q9C0I3 900 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 CDT1Q9H211 546 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 RXFP1Q9HBX9 757 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 CACNG4Q9UBN1 327 aa25.3■■□□□ 1.64
CLDND1-230ENST00000514537 CASTOR2A6NHX0 329 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 ABLIM1O14639 778 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 TADA2AO75478 443 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 MAPTP10636 758 aaKnown RBP25.29■■□□□ 1.64
CLDND1-230ENST00000514537 PLCG1P19174 1290 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 GRM5P41594 1212 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 CACNB1Q02641 598 aaPredicted RBP25.29■■□□□ 1.64
CLDND1-230ENST00000514537 TMEM31Q5JXX7 168 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 CES5AQ6NT32 575 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 GPR65Q8IYL9 337 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 C12orf76Q8N812 135 aaPredicted RBP25.29■■□□□ 1.64
CLDND1-230ENST00000514537 RAD54LQ92698 747 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 RPGRIP1Q96KN7 1286 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 LRFN3Q9BTN0 628 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 LARSQ9P2J5 1176 aaKnown RBP25.29■■□□□ 1.64
CLDND1-230ENST00000514537 ODF2LQ9ULJ1 636 aa25.29■■□□□ 1.64
CLDND1-230ENST00000514537 TEX28O15482 410 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 STX6O43752 255 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 BRD1O95696 1058 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 MARCKSP29966 332 aaPredicted RBP25.28■■□□□ 1.64
CLDND1-230ENST00000514537 STRN3Q13033 797 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 USP41Q3LFD5 358 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 ZNF568Q3ZCX4 644 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 KIAA1841Q6NSI8 718 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 GPBP1Q86WP2 473 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 CEP120Q8N960 986 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 KCNN1Q92952 543 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 FBXL18Q96ME1 805 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 NECTIN4Q96NY8 510 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 CDH22Q9UJ99 828 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 FBXO2Q9UK22 296 aaPredicted RBP25.28■■□□□ 1.64
CLDND1-230ENST00000514537 SRPRBQ9Y5M8 271 aaKnown RBP25.28■■□□□ 1.64
CLDND1-230ENST00000514537 GTF3C3Q9Y5Q9 886 aa25.28■■□□□ 1.64
CLDND1-230ENST00000514537 MCF2P10911 925 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 DHX8Q14562 1220 aaKnown RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 MCM6Q14566 821 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 XKR4Q5GH76 650 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 HERC4Q5GLZ8 1057 aaPredicted RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 RARS2Q5T160 578 aaKnown RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 ALKAL1Q6UXT8 129 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 USP49Q70CQ1 688 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 ZBTB33Q86T24 672 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 RASSF8Q8NHQ8 419 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 EPSTI1Q96J88 318 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 PPP1R10Q96QC0 940 aaKnown RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 REEP2Q9BRK0 252 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 TCHPQ9BT92 498 aa25.27■■□□□ 1.64
CLDND1-230ENST00000514537 CCDC94Q9BW85 323 aaPredicted RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 ZSCAN16Q9H4T2 348 aaPredicted RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 TDRD15B5MCY1 1934 aaKnown RBP25.27■■□□□ 1.64
CLDND1-230ENST00000514537 ADH1AP07327 375 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 COL9A1P20849 921 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 DDIT3P35638 169 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 MTHFRP42898 656 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 NCKAP1LP55160 1127 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 SPECC1Q5M775 1068 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 KANK3Q6NY19 840 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 MPZL3Q6UWV2 235 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms