RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 JPH2Q9BR39 696 aaPredicted RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 APOL6Q9BWW8 343 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 SLC26A6Q9BXS9 759 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 EIF2AQ9BY44 585 aaKnown RBP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 SLC2A4RGQ9NR83 387 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTPN20-216ENST00000506080 NCDNQ9UBB6 729 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 HES2Q9Y543 173 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 IPPQ9Y573 584 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 DOCK8Q8NF50 2099 aa10.27□□□□□ -0.77
PTPN20-216ENST00000506080 COL4A3Q01955 1670 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 ARL5CA6NH57 179 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 EML1O00423 815 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 EFEMP2O95967 443 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 STARD6P59095 220 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 PSMC5P62195 406 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 GPC5P78333 572 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 IRX6P78412 446 aaPredicted RBP10.26□□□□□ -0.77
PTPN20-216ENST00000506080 NTHL1P78549 312 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 DSC1Q08554 894 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 LAMTOR4Q0VGL1 99 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 SNW1Q13573 536 aaKnown RBP10.26□□□□□ -0.77
PTPN20-216ENST00000506080 KRT32Q14532 448 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 PARM1Q6UWI2 310 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 RNF149Q8NC42 400 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 HDAC7Q8WUI4 952 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 PSPC1Q8WXF1 523 aaKnown RBP10.26□□□□□ -0.77
PTPN20-216ENST00000506080 SLC7A3Q8WY07 619 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 RABGGTAQ92696 567 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 FGF14Q92915 247 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 CPB2Q96IY4 423 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 CEP170P1Q96L14 293 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 ZFP42Q96MM3 310 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 GPR62Q9BZJ7 368 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 PLEKHA4Q9H4M7 779 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 UBN1Q9NPG3 1134 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 SPATA6Q9NWH7 488 aaPredicted RBP10.26□□□□□ -0.77
PTPN20-216ENST00000506080 ZDHHC7Q9NXF8 308 aa10.26□□□□□ -0.77
PTPN20-216ENST00000506080 OTOGLQ3ZCN5 2332 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 CACNA1IQ9P0X4 2223 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 KANSL1LA0AUZ9 987 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 LAMTOR5O43504 91 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 NR1I2O75469 434 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 ERLIN2O94905 339 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 FSHRP23945 695 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 CSTF1Q05048 431 aaKnown RBP10.25□□□□□ -0.77
PTPN20-216ENST00000506080 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 LAPTM4AQ15012 233 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 NTRK3Q16288 839 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 FUT10Q6P4F1 479 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 LILRA6Q6PI73 481 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 GRASPQ7Z6J2 395 aaPredicted RBP10.25□□□□□ -0.77
PTPN20-216ENST00000506080 CNNM3Q8NE01 707 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 ETNPPLQ8TBG4 499 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 SHDQ96IW2 340 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 COLEC11Q9BWP8 271 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 RNF26Q9BY78 433 aaPredicted RBP10.25□□□□□ -0.77
PTPN20-216ENST00000506080 CHST7Q9NS84 486 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
PTPN20-216ENST00000506080 MTF2Q9Y483 593 aaPredicted RBP10.25□□□□□ -0.77
PTPN20-216ENST00000506080 FANCMQ8IYD8 2048 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 FRYLO94915 3013 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 NCOR2Q9Y618 2525 aa10.25□□□□□ -0.77
PTPN20-216ENST00000506080 CYP3A7-CYP3A51PA0A087WV96 503 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 ZMYND10O75800 440 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 PAPLNO95428 1278 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 S1PR4O95977 384 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CD72P21854 359 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CYP3A7P24462 503 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 QARSP47897 775 aaKnown RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 ATXN1P54253 815 aaKnown RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 MLF2Q15773 248 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 USP41Q3LFD5 358 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 PRSS55Q6UWB4 352 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 BCO2Q9BYV7 579 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 SLKQ9H2G2 1235 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 DHX33Q9H6R0 707 aaKnown RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 FNIP2Q9P278 1114 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CACNG4Q9UBN1 327 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CDH7Q9ULB5 785 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 NID2Q14112 1375 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CEP250Q9BV73 2442 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 FAM170BA6NMN3 283 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 SLC37A4O43826 429 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 TSPAN1O60635 241 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 IFNAR1P17181 557 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 AKAP5P24588 427 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 RFC5P40937 340 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 EMC2Q15006 297 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 SLC44A4Q53GD3 710 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 NOTUMQ6P988 496 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 FERMT3Q86UX7 667 aa10.24□□□□□ -0.77
PTPN20-216ENST00000506080 CDR2LQ86X02 465 aaPredicted RBP10.24□□□□□ -0.77
PTPN20-216ENST00000506080 GPIHBP1Q8IV16 184 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms