RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 CCT6AP40227 531 aaKnown RBP21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 TCF15Q12870 199 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 HSP90AA2PQ14568 343 aaPredicted RBP21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 BSNDQ8WZ55 320 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 IFT74Q96LB3 600 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 GPR62Q9BZJ7 368 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 CCDC113Q9H0I3 377 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 FNIP2Q9P278 1114 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 CCDC195A0A1B0GUA6 201 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 TADA2AO75478 443 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 EFNA5P52803 228 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 DCAF4L1Q3SXM0 396 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 FEZF2Q8TBJ5 459 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 KIFAP3Q92845 792 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 LRWD1Q9UFC0 647 aa21.5■■□□□ 1.03
R3HDM1-215ENST00000483021 USP34Q70CQ2 3546 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 RECQL4O94761 1208 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 PAPLNO95428 1278 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 THP07101 528 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 U2AF2P26368 475 aaKnown RBP eCLIP21.49■■□□□ 1.032e-7■□□□□ 10.9
R3HDM1-215ENST00000483021 PDIA5Q14554 519 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 APBB1IPQ7Z5R6 666 aaPredicted RBP21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 RIN2Q8WYP3 895 aaPredicted RBP21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 BHMT2Q9H2M3 363 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 SMOC2Q9H3U7 446 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 WDR6Q9NNW5 1121 aaKnown RBP21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 ZDHHC7Q9NXF8 308 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 SNTG2Q9NY99 539 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 IGSF9Q9P2J2 1179 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 DOCK8Q8NF50 2099 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 CLUHO75153 1309 aa21.49■■□□□ 1.03
R3HDM1-215ENST00000483021 TTLL13PA6NNM8 815 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 TDGQ13569 410 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 C4orf32Q8N8J7 132 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 SMG7Q92540 1137 aaKnown RBP21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 B3GALT6Q96L58 329 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 MFSD1Q9H3U5 465 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 KIF3AQ9Y496 699 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 TRIP11Q15643 1979 aa21.48■■□□□ 1.03
R3HDM1-215ENST00000483021 CASTOR2A6NHX0 329 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 LAD1O00515 517 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 PTGESO14684 152 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 TGM5O43548 720 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 RFPL2O75678 378 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 LIG1P18858 919 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 ELAVL2Q12926 359 aaKnown RBP21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 PALB2Q86YC2 1186 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 IGSF22Q8N9C0 903 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 SNX29Q8TEQ0 813 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 KIF2CQ99661 725 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 KCNK12Q9HB15 430 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 DUSP12Q9UNI6 340 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 KIAA1024Q9UPX6 916 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 VWA8A3KMH1 1905 aa21.47■■□□□ 1.03
R3HDM1-215ENST00000483021 GALR2O43603 387 aaPredicted RBP21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 KIF4AO95239 1232 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 GBP2P32456 591 aaPredicted RBP21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 PTGDRQ13258 359 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 NBR1Q14596 966 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 ECM1Q16610 540 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 PDXDC1Q6P996 788 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 PIK3R5Q8WYR1 880 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 RABGGTAQ92696 567 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 PAAF1Q9BRP4 392 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 TTPALQ9BTX7 342 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 KIFC3Q9BVG8 833 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 PIDD1Q9HB75 910 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 DDX19AQ9NUU7 478 aaKnown RBP21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 PHLPP2Q6ZVD8 1323 aa21.46■■□□□ 1.03
R3HDM1-215ENST00000483021 EDN1P05305 212 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 RTP2Q5QGT7 225 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 ATF7IP2Q5U623 682 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 EEF1DP3Q658K8 133 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 ASTLQ6HA08 431 aaPredicted RBP21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 LILRA6Q6PI73 481 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 GLYCTKQ8IVS8 523 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 HASPINQ8TF76 798 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 ZNF707Q96C28 371 aaPredicted RBP21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 NT5C3AQ9H0P0 336 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 EPS15L1Q9UBC2 864 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 CACNG4Q9UBN1 327 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 GDAQ9Y2T3 454 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 MYH11P35749 1972 aa21.45■■□□□ 1.02
R3HDM1-215ENST00000483021 SPATA31D3P0C874 917 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 PRPHP41219 470 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 TOB1P50616 345 aaPredicted RBP21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 CLCN5P51795 746 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 NAB2Q15742 525 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 PSMD5Q16401 504 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 C8orf34Q49A92 452 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 FAM171A1Q5VUB5 890 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 KRT79Q5XKE5 535 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 PRSS55Q6UWB4 352 aaPredicted RBP21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 SPATA31D4Q6ZUB0 917 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 TMEM105Q8N8V8 129 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 NXPE3Q969Y0 559 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 PHOX2BQ99453 314 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 PRKD2Q9BZL6 878 aa21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.44■■□□□ 1.02
R3HDM1-215ENST00000483021 DNM3Q9UQ16 869 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms