RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 USP37Q86T82 979 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SFR1Q86XK3 245 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ZC3H3Q8IXZ2 948 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PDILTQ8N807 584 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 FSIP1Q8NA03 581 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SPRYD3Q8NCJ5 442 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PPP1R13LQ8WUF5 828 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PPP2R3CQ969Q6 453 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 DDX27Q96GQ7 796 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PPP1R10Q96QC0 940 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 ZBED2Q9BTP6 218 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CCDC94Q9BW85 323 aaPredicted RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CDT1Q9H211 546 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SEMA6BQ9H3T3 888 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CWH43Q9H720 699 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 NGRNQ9NPE2 291 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 TYW1Q9NV66 732 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 TBC1D13Q9NVG8 400 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 MTMR10Q9NXD2 777 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 CPSF3Q9UKF6 684 aaKnown RBP5.56□□□□□ -1.52
HDAC6-223ENST00000480525 MAFFQ9ULX9 164 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 GINS2Q9Y248 185 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 STXBP5LQ9Y2K9 1186 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 PCDHB12Q9Y5F1 795 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 SCN1AP35498 2009 aa5.56□□□□□ -1.52
HDAC6-223ENST00000480525 TSC2P49815 1807 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 SOX1O00570 391 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 IKBKBO14920 756 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 B4GALT5O43286 388 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 STAU1O95793 577 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 RPN1P04843 607 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 EDN1P05305 212 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 THP07101 528 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 POU2F2P09086 479 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 RPL13P26373 211 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ALDH7A1P49419 539 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 AARSP49588 968 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 LIG4P49917 911 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 MARSP56192 900 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ASIC1P78348 528 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 KRT17Q04695 432 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 BMS1Q14692 1282 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ZRSR1Q15695 479 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 KNOP1Q1ED39 458 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ZCWPW2Q504Y3 356 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 EPC2Q52LR7 807 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF658Q5TYW1 1059 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 CENPPQ6IPU0 288 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 SLC39A4Q6P5W5 647 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 CYP26C1Q6V0L0 522 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 TMEM184AQ6ZMB5 413 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 DYMQ7RTS9 669 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 TRMT1LQ7Z2T5 733 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 DDX53Q86TM3 631 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 BRSK2Q8IWQ3 736 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 TMEM192Q8IY95 271 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 COLGALT2Q8IYK4 626 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 SLC39A11Q8N1S5 342 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 FBXO22Q8NEZ5 403 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 HDAC7Q8WUI4 952 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 SCFD1Q8WVM8 642 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 MRPL38Q96DV4 380 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 SNX27Q96L92 541 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ZNF558Q96NG5 402 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 ACAP3Q96P50 834 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 TARS2Q9BW92 718 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 TTYH1Q9H313 450 aaPredicted RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 KCTD10Q9H3F6 313 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 GOLPH3LQ9H4A5 285 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 EXOC1Q9NV70 894 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 DMAC2Q9NW81 257 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 HSFX1Q9UBD0 423 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 DPP7Q9UHL4 492 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 SERTAD1Q9UHV2 236 aa5.55□□□□□ -1.52
HDAC6-223ENST00000480525 UBQLN1Q9UMX0 589 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 YBX2Q9Y2T7 364 aaKnown RBP5.55□□□□□ -1.52
HDAC6-223ENST00000480525 PTPRDP23468 1912 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 DENND4AQ7Z401 1863 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 PTGESO14684 152 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 FSCN2O14926 492 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 SYN3O14994 580 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 TRAPPC3O43617 180 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 EXTL3O43909 919 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 LPXNO60711 386 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 RECQL4O94761 1208 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 GCNT3O95395 438 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 CAVIN2O95810 425 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 ALDH2P05091 517 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 GALTP07902 379 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 IDEP14735 1019 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 NMT1P30419 496 aaKnown RBP5.54□□□□□ -1.52
HDAC6-223ENST00000480525 ADSSP30520 456 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 PNPLA4P41247 253 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 PPP2R3AQ06190 1150 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 SMARCB1Q12824 385 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 STIM1Q13586 685 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 CUL4BQ13620 913 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 KMT5BQ4FZB7 885 aa5.54□□□□□ -1.52
HDAC6-223ENST00000480525 SPATA1Q5VX52 437 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms