RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ZBTB33Q86T24 672 aa26.36■■□□□ 1.81
CPNE1-223ENST00000475146 TMEM87AQ8NBN3 555 aa26.36■■□□□ 1.81
CPNE1-223ENST00000475146 VN1R3Q9BXE9 311 aa26.36■■□□□ 1.81
CPNE1-223ENST00000475146 MARCH5Q9NX47 278 aa26.36■■□□□ 1.81
CPNE1-223ENST00000475146 CD207Q9UJ71 328 aa26.36■■□□□ 1.81
CPNE1-223ENST00000475146 FAM50BQ9Y247 325 aa26.36■■□□□ 1.81
CPNE1-223ENST00000475146 GRXCR2A6NFK2 248 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 K7ENM7 598 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 PPP6R2O75170 966 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 SRGAP2BP0DMP2 458 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 STAT6P42226 847 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 NCKAP1LP55160 1127 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 RBM10P98175 930 aaKnown RBP26.35■■□□□ 1.81
CPNE1-223ENST00000475146 LLGL2Q6P1M3 1020 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 MPZL3Q6UWV2 235 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 CCDC73Q6ZRK6 1079 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 VN1R2Q8NFZ6 395 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 CCDC94Q9BW85 323 aaPredicted RBP26.35■■□□□ 1.81
CPNE1-223ENST00000475146 COLEC11Q9BWP8 271 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 ANKFY1Q9P2R3 1169 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 STK39Q9UEW8 545 aa26.35■■□□□ 1.81
CPNE1-223ENST00000475146 PTGESO14684 152 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 ZNF131P52739 623 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 OSTNP61366 133 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 HAUS6Q7Z4H7 955 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 CEP120Q8N960 986 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 BICD1Q96G01 975 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 PANK2Q9BZ23 570 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 PTPRHQ9HD43 1115 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 CLEC1BQ9P126 229 aa26.34■■□□□ 1.81
CPNE1-223ENST00000475146 TNFRSF10AO00220 468 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 TRAK2O60296 914 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 THP07101 528 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 MCF2P10911 925 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 GRM5P41594 1212 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 YARSP54577 528 aaKnown RBP26.33■■□□□ 1.81
CPNE1-223ENST00000475146 TUSC3Q13454 348 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 SMAD4Q13485 552 aaKnown RBP26.33■■□□□ 1.81
CPNE1-223ENST00000475146 SV2BQ7L1I2 683 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 DYMQ7RTS9 669 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 PDILTQ8N807 584 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 RABGGTAQ92696 567 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 CXCL16Q9H2A7 254 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 CACNG4Q9UBN1 327 aa26.33■■□□□ 1.81
CPNE1-223ENST00000475146 CASTOR2A6NHX0 329 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 F8W810 466 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 TOM1L1O75674 476 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 PROZP22891 400 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 MATR3P43243 847 aaKnown RBP eCLIP26.32■■□□□ 1.8
CPNE1-223ENST00000475146 GLRA4Q5JXX5 417 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 ZPBP2Q6X784 338 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 FAM178BQ8IXR5 827 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 ZBTB45Q96K62 511 aaPredicted RBP26.32■■□□□ 1.8
CPNE1-223ENST00000475146 MSLNLQ96KJ4 702 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 HERC2P3Q9BVR0 1158 aa26.32■■□□□ 1.8
CPNE1-223ENST00000475146 A0A087X0B3 334 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 ABLIM1O14639 778 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 MBTPS2O43462 519 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 CUTAO60888 179 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 CLASP2O75122 1294 aaKnown RBP26.31■■□□□ 1.8
CPNE1-223ENST00000475146 SOD2P04179 222 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 URODP06132 367 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 NOLC1Q14978 699 aaKnown RBP eCLIP26.31■■□□□ 1.8
CPNE1-223ENST00000475146 PTPN14Q15678 1187 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 KCNG4Q8TDN1 519 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 DDX12PQ92771 950 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 TOPORSQ9NS56 1045 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-223ENST00000475146 IRAK3Q9Y616 596 aa26.31■■□□□ 1.8
CPNE1-223ENST00000475146 C2CD2LO14523 706 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 BRD1O95696 1058 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 SCP2P22307 547 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 LIG4P49917 911 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 COASYQ13057 564 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 HSP90AA2PQ14568 343 aaPredicted RBP26.3■■□□□ 1.8
CPNE1-223ENST00000475146 ATL3Q6DD88 541 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 ACAP3Q96P50 834 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 PAAF1Q9BRP4 392 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 MRPL17Q9NRX2 175 aaKnown RBP26.3■■□□□ 1.8
CPNE1-223ENST00000475146 TBX20Q9UMR3 447 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 HCFC2Q9Y5Z7 792 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 TTC28Q96AY4 2481 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 CUL9Q8IWT3 2517 aa26.3■■□□□ 1.8
CPNE1-223ENST00000475146 MYMKA6NI61 221 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 CLDN3O15551 220 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 NMT1P30419 496 aaKnown RBP26.29■■□□□ 1.8
CPNE1-223ENST00000475146 DNM1Q05193 864 aaKnown RBP26.29■■□□□ 1.8
CPNE1-223ENST00000475146 KCNC3Q14003 757 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 FUT10Q6P4F1 479 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 SFR1Q86XK3 245 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 SMRP1Q8NCR6 262 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 CASP10Q92851 521 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 EMILIN2Q9BXX0 1053 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 ADAM28Q9UKQ2 775 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 CFAP45Q9UL16 551 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 XIRP2A4UGR9 3374 aa26.29■■□□□ 1.8
CPNE1-223ENST00000475146 HNRNPDLO14979 420 aaKnown RBP26.28■■□□□ 1.8
CPNE1-223ENST00000475146 TADA2AO75478 443 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 ME1P48163 572 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 GLUD2P49448 558 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 KIAA1841Q6NSI8 718 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms