RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 FUT10Q6P4F1 479 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 TAS1R3Q7RTX0 852 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 PPFIBP1Q86W92 1011 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 COLEC11Q9BWP8 271 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 CDT1Q9H211 546 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 S1PR5Q9H228 398 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 CACNG4Q9UBN1 327 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
SF3A3-204ENST00000462258 CDH22Q9UJ99 828 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 ADAM28Q9UKQ2 775 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 TNFSF13BQ9Y275 285 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 GDAQ9Y2T3 454 aa11.18□□□□□ -0.62
SF3A3-204ENST00000462258 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 NPHP3-ACAD11A0A0J9YXS1 232 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 SFI1A8K8P3 1242 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 LOC730098B7Z3J9 87 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 DCXO43602 365 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 KIF4AO95239 1232 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 EFEMP2O95967 443 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 THP07101 528 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 CNPP09543 421 aaKnown RBP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 ALADP13716 330 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 PLCG1P19174 1290 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 ITIH3Q06033 890 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 GLRA4Q5JXX5 417 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 TMEM31Q5JXX7 168 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 RARS2Q5T160 578 aaKnown RBP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 CES5AQ6NT32 575 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 GPBP1Q86WP2 473 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 CEP120Q8N960 986 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 LRRC15Q8TF66 581 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 SLC22A17Q8WUG5 538 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 SPIRE2Q8WWL2 714 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 RABGGTAQ92696 567 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 RPGRIP1Q96KN7 1286 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 KLHL5Q96PQ7 755 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 ACO2Q99798 780 aaKnown RBP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 REEP2Q9BRK0 252 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 PAAF1Q9BRP4 392 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 TARS2Q9BW92 718 aaKnown RBP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 SFXN1Q9H9B4 322 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 C11orf16Q9NQ32 467 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 MUTYHQ9UIF7 546 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 ODF2LQ9ULJ1 636 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 MTMR6Q9Y217 621 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 CLIC4Q9Y696 253 aa11.17□□□□□ -0.62
SF3A3-204ENST00000462258 MTCL1Q9Y4B5 1905 aaKnown RBP11.17□□□□□ -0.62
SF3A3-204ENST00000462258 STX6O43752 255 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 LILRB3O75022 631 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 ADH1AP07327 375 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 MAPTP10636 758 aaKnown RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 HARSP12081 509 aaKnown RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 PROZP22891 400 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 KLRC2P26717 231 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 GRM5P41594 1212 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 CLCN4P51793 760 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 SMTNP53814 917 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 NCKAP1LP55160 1127 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 DSG1Q02413 1049 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 STRN3Q13033 797 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 DHX8Q14562 1220 aaKnown RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 PTPAQ15257 358 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 NAB2Q15742 525 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 KIAA1841Q6NSI8 718 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 MPZL3Q6UWV2 235 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 TAS1R1Q7RTX1 841 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 ZBTB33Q86T24 672 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 RNF135Q8IUD6 432 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 HSCBQ8IWL3 235 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 TMEM161BQ8NDZ6 487 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 HASPINQ8TF76 798 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 LARP4BQ92615 738 aaKnown RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 RAD54LQ92698 747 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 B3GALT6Q96L58 329 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 FBXL18Q96ME1 805 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 NECTIN4Q96NY8 510 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 GPR62Q9BZJ7 368 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 CXCL16Q9H2A7 254 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 ADAM7Q9H2U9 754 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 POMKQ9H5K3 350 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 PTPRHQ9HD43 1115 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 TOPORSQ9NS56 1045 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 BLOC1S4Q9NUP1 217 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 LARSQ9P2J5 1176 aaKnown RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 ANKFY1Q9P2R3 1169 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 KCNG1Q9UIX4 513 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 FBXO2Q9UK22 296 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-204ENST00000462258 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
SF3A3-204ENST00000462258 H0YCG3 227 aa11.15□□□□□ -0.62
SF3A3-204ENST00000462258 K7ENM7 598 aa11.15□□□□□ -0.62
SF3A3-204ENST00000462258 ABLIM1O14639 778 aa11.15□□□□□ -0.62
SF3A3-204ENST00000462258 TEX28O15482 410 aa11.15□□□□□ -0.62
SF3A3-204ENST00000462258 TBCAO75347 108 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms