RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 TMEM134Q9H6X4 195 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 CACNG4Q9UBN1 327 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 GDAQ9Y2T3 454 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 RBM19Q9Y4C8 960 aaKnown RBP20.81■□□□□ 0.92
COL5A1-203ENST00000460264 CITO14578 2027 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 C2orf16Q68DN1 1984 aa20.81■□□□□ 0.92
COL5A1-203ENST00000460264 SFI1A8K8P3 1242 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 C2CD2LO14523 706 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 SYT1P21579 422 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 GRIN1Q05586 938 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 HERC4Q5GLZ8 1057 aaPredicted RBP20.8■□□□□ 0.92
COL5A1-203ENST00000460264 CES5AQ6NT32 575 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 FUT10Q6P4F1 479 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 APBB1IPQ7Z5R6 666 aaPredicted RBP20.8■□□□□ 0.92
COL5A1-203ENST00000460264 RPGRIP1Q96KN7 1286 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 ACO2Q99798 780 aaKnown RBP20.8■□□□□ 0.92
COL5A1-203ENST00000460264 PAAF1Q9BRP4 392 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 MRPL4Q9BYD3 311 aaKnown RBP20.8■□□□□ 0.92
COL5A1-203ENST00000460264 KCND2Q9NZV8 630 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 MUTYHQ9UIF7 546 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 ADAM28Q9UKQ2 775 aa20.8■□□□□ 0.92
COL5A1-203ENST00000460264 K7ELQ4 463 aaPredicted RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 SLC16A4O15374 487 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 THP07101 528 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 PLS3P13797 630 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 KLRC2P26717 231 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 LONP1P36776 959 aaKnown RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 UBA7P41226 1012 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 CLCN4P51793 760 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 DSG1Q02413 1049 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 RESTQ13127 1097 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 HSP90AA2PQ14568 343 aaPredicted RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 NAB2Q15742 525 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 ZNF568Q3ZCX4 644 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 RARS2Q5T160 578 aaKnown RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 KIAA0319Q5VV43 1072 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 C12orf76Q8N812 135 aaPredicted RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 LRRC15Q8TF66 581 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 SPIRE2Q8WWL2 714 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 FBXL18Q96ME1 805 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 NTPCRQ9BSD7 190 aaKnown RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 TARS2Q9BW92 718 aaKnown RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 GPR62Q9BZJ7 368 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 CDT1Q9H211 546 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 CHST7Q9NS84 486 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 SSX2IPQ9Y2D8 614 aa20.79■□□□□ 0.92
COL5A1-203ENST00000460264 PDCD11Q14690 1871 aaKnown RBP20.79■□□□□ 0.92
COL5A1-203ENST00000460264 VWA8A3KMH1 1905 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 CASTOR2A6NHX0 329 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 ARSHQ5FYA8 562 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 KIAA1841Q6NSI8 718 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 KANK3Q6NY19 840 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 TMEM161BQ8NDZ6 487 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 CALML4Q96GE6 196 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 B3GALT6Q96L58 329 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 NECTIN4Q96NY8 510 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 POMKQ9H5K3 350 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 PTPRHQ9HD43 1115 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 RAPGEFL1Q9UHV5 662 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
COL5A1-203ENST00000460264 MTCL1Q9Y4B5 1905 aaKnown RBP20.78■□□□□ 0.92
COL5A1-203ENST00000460264 SF3B1O75533 1304 aaKnown RBP eCLIP20.78■□□□□ 0.92
COL5A1-203ENST00000460264 NPHP3-ACAD11A0A0J9YXS1 232 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 TEX28O15482 410 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 KIF4AO95239 1232 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 ADH1AP07327 375 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 WEE2P0C1S8 567 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 PLCG1P19174 1290 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 PROZP22891 400 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 GRM5P41594 1212 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 CACNB1Q02641 598 aaPredicted RBP20.77■□□□□ 0.92
COL5A1-203ENST00000460264 PTPAQ15257 358 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 CEP120Q8N960 986 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 SFXN1Q9H9B4 322 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 RXFP1Q9HBX9 757 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 BLOC1S4Q9NUP1 217 aa20.77■□□□□ 0.92
COL5A1-203ENST00000460264 ABLIM1O14639 778 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 TADA2AO75478 443 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 MAPTP10636 758 aaKnown RBP20.76■□□□□ 0.91
COL5A1-203ENST00000460264 MTHFRP42898 656 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 SMTNP53814 917 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 KARSQ15046 597 aaKnown RBP20.76■□□□□ 0.91
COL5A1-203ENST00000460264 USP41Q3LFD5 358 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 GLRA4Q5JXX5 417 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 FAM173BQ6P4H8 233 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 GPBP1Q86WP2 473 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 GPR65Q8IYL9 337 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 FEZF2Q8TBJ5 459 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 HASPINQ8TF76 798 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 RIPOR3Q96MK2 946 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 PPP1R10Q96QC0 940 aaKnown RBP20.76■□□□□ 0.91
COL5A1-203ENST00000460264 REEP2Q9BRK0 252 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 FOXD4L1Q9NU39 408 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 KCNG1Q9UIX4 513 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 ODF2LQ9ULJ1 636 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 MTMR6Q9Y217 621 aa20.76■□□□□ 0.91
COL5A1-203ENST00000460264 TECTAO75443 2155 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 PRR33A8MZF0 331 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 BRD1O95696 1058 aa20.75■□□□□ 0.91
COL5A1-203ENST00000460264 MCF2P10911 925 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms