RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 TBC1D7Q9P0N9 293 aa17.22■□□□□ 0.35
ACTB-206ENST00000443528 ANKFY1Q9P2R3 1169 aa17.22■□□□□ 0.35
ACTB-206ENST00000443528 SERTAD1Q9UHV2 236 aa17.22■□□□□ 0.35
ACTB-206ENST00000443528 ATG2AQ2TAZ0 1938 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 NRP1O14786 923 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 FSCN2O14926 492 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 MEFVO15553 781 aaPredicted RBP17.21■□□□□ 0.35
ACTB-206ENST00000443528 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
ACTB-206ENST00000443528 ALDH2P05091 517 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 CASP1P29466 404 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 OSTNP61366 133 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 AMPD3Q01432 767 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 KRT17Q04695 432 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 GRIK3Q13003 919 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 NOLC1Q14978 699 aaKnown RBP eCLIP17.21■□□□□ 0.35
ACTB-206ENST00000443528 SKIV2LQ15477 1246 aaKnown RBP17.21■□□□□ 0.35
ACTB-206ENST00000443528 NAB2Q15742 525 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 SLC39A4Q6P5W5 647 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 ADGRD2Q7Z7M1 963 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 BICD1Q96G01 975 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 RPS6KC1Q96S38 1066 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 IKZF4Q9H2S9 585 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 MRPL44Q9H9J2 332 aaKnown RBP17.21■□□□□ 0.35
ACTB-206ENST00000443528 PUF60Q9UHX1 559 aaKnown RBP17.21■□□□□ 0.35
ACTB-206ENST00000443528 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
ACTB-206ENST00000443528 A0A1W2PQ27 194 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 A0A1W2PQ64 194 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 CARNS1A5YM72 827 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 ANKRD63C9JTQ0 380 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 HNRNPDLO14979 420 aaKnown RBP17.2■□□□□ 0.34
ACTB-206ENST00000443528 CLDN3O15551 220 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 SLFN14P0C7P3 912 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 MYBP10242 640 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
ACTB-206ENST00000443528 ABCD1P33897 745 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 LIG4P49917 911 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 CASP5P51878 434 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 NDUFA8P51970 172 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 KCNA1Q09470 495 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 HYAL1Q12794 435 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 COASYQ13057 564 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 SEZ6Q53EL9 994 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 XKR4Q5GH76 650 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 ALKAL1Q6UXT8 129 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.2■□□□□ 0.347e-13■■■■□ 19.9
ACTB-206ENST00000443528 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 GRAMD1CQ8IYS0 662 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 TMEM169Q96HH4 297 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 PYM1Q9BRP8 204 aaKnown RBP17.2■□□□□ 0.34
ACTB-206ENST00000443528 CCDC94Q9BW85 323 aaPredicted RBP17.2■□□□□ 0.34
ACTB-206ENST00000443528 VN1R3Q9BXE9 311 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 GOLPH3LQ9H4A5 285 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 MARCH5Q9NX47 278 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 CACNG4Q9UBN1 327 aa17.2■□□□□ 0.34
ACTB-206ENST00000443528 CIZ1Q9ULV3 898 aaPredicted RBP17.2■□□□□ 0.34
ACTB-206ENST00000443528 TCHHQ07283 1943 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 UNC80Q8N2C7 3258 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 TISP43B9A030 160 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 F8W810 466 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 THP07101 528 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.342e-13■■□□□ 12.1
ACTB-206ENST00000443528 AFMP43652 599 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 OR1G1P47890 313 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 ASIC1P78348 528 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 TPRNQ4KMQ1 711 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 DDX53Q86TM3 631 aaKnown RBP17.19■□□□□ 0.34
ACTB-206ENST00000443528 MICAL1Q8TDZ2 1067 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 HPS3Q969F9 1004 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 HVCN1Q96D96 273 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 TCF25Q9BQ70 676 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 BLZF1Q9H2G9 400 aa17.19■□□□□ 0.34
ACTB-206ENST00000443528 PRG3Q9Y2Y8 225 aaPredicted RBP17.19■□□□□ 0.34
ACTB-206ENST00000443528 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 A0A0B4J269 797 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 FAM189A1O60320 539 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 GCNT3O95395 438 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 EFEMP2O95967 443 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 ANP32AP39687 249 aaKnown RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTB-206ENST00000443528 YARSP54577 528 aaKnown RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 EHHADHQ08426 723 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 TUSC3Q13454 348 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 CUL4BQ13620 913 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 SLC10A6Q3KNW5 377 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 GLRA4Q5JXX5 417 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 L1TD1Q5T7N2 865 aaKnown RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 PLPP4Q5VZY2 271 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 PDE12Q6L8Q7 609 aaKnown RBP17.18■□□□□ 0.34
ACTB-206ENST00000443528 TMC7Q7Z402 723 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 CEP57L1Q8IYX8 460 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 VPS52Q8N1B4 723 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 FSIP1Q8NA03 581 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 GLIS3Q8NEA6 775 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 RABGGTAQ92696 567 aa17.18■□□□□ 0.34
ACTB-206ENST00000443528 PAGE5Q96GU1 130 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms