RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 S1PR5Q9H228 398 aa19.32■□□□□ 0.68
NUP50-208ENST00000430547 ADAM28Q9UKQ2 775 aa19.32■□□□□ 0.68
NUP50-208ENST00000430547 PLXNA3P51805 1871 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 SLC16A4O15374 487 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 TADA2AO75478 443 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 PLS3P13797 630 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 EPCAMP16422 314 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 YARSP54577 528 aaKnown RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 DHX8Q14562 1220 aaKnown RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 HSP90AA2PQ14568 343 aaPredicted RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 TMEM31Q5JXX7 168 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 FUT10Q6P4F1 479 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 RPGRIP1Q96KN7 1286 aa19.31■□□□□ 0.68
NUP50-208ENST00000430547 ACO2Q99798 780 aaKnown RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 CCDC94Q9BW85 323 aaPredicted RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 TOPORSQ9NS56 1045 aaPredicted RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 LARSQ9P2J5 1176 aaKnown RBP19.31■□□□□ 0.68
NUP50-208ENST00000430547 CASTOR2A6NHX0 329 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 H0YCG3 227 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 PTGESO14684 152 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 KRT18P05783 430 aaKnown RBP19.3■□□□□ 0.68
NUP50-208ENST00000430547 ADH1AP07327 375 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 CNPP09543 421 aaKnown RBP19.3■□□□□ 0.68
NUP50-208ENST00000430547 RESTQ13127 1097 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 RARS2Q5T160 578 aaKnown RBP19.3■□□□□ 0.68
NUP50-208ENST00000430547 ELMSAN1Q6PJG2 1045 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 GPBP1Q86WP2 473 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 SPIRE2Q8WWL2 714 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 RIPOR3Q96MK2 946 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 NECTIN4Q96NY8 510 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 KLHL5Q96PQ7 755 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 TARS2Q9BW92 718 aaKnown RBP19.3■□□□□ 0.68
NUP50-208ENST00000430547 ADAM7Q9H2U9 754 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 ODF2LQ9ULJ1 636 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 CLIC4Q9Y696 253 aa19.3■□□□□ 0.68
NUP50-208ENST00000430547 MTCL1Q9Y4B5 1905 aaKnown RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 SF3B1O75533 1304 aaKnown RBP eCLIP19.29■□□□□ 0.682e-7■■■■■ 41.4
NUP50-208ENST00000430547 F8W810 466 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 HSP90AA1P07900 732 aaKnown RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 PLCG1P19174 1290 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 TXLNAP40222 546 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 MTHFRP42898 656 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 CEBPZQ03701 1054 aaKnown RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 GRIN1Q05586 938 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 KARSQ15046 597 aaKnown RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 USP41Q3LFD5 358 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 TAS1R1Q7RTX1 841 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 ZBTB33Q86T24 672 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 RNF135Q8IUD6 432 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 HSCBQ8IWL3 235 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 RNF168Q8IYW5 571 aaPredicted RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 SLC22A17Q8WUG5 538 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 RABGGTAQ92696 567 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 NTPCRQ9BSD7 190 aaKnown RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 CDT1Q9H211 546 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 ZSCAN16Q9H4T2 348 aaPredicted RBP19.29■□□□□ 0.68
NUP50-208ENST00000430547 DPP7Q9UHL4 492 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
NUP50-208ENST00000430547 NPHP3-ACAD11A0A0J9YXS1 232 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 FAM86C2PA6NEL3 165 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 LOC730098B7Z3J9 87 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 STX6O43752 255 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 FAM13AO94988 1023 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 HARSP12081 509 aaKnown RBP19.28■□□□□ 0.68
NUP50-208ENST00000430547 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
NUP50-208ENST00000430547 GRM5P41594 1212 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 CLCN4P51793 760 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 OSTNP61366 133 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 DSG1Q02413 1049 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 CREMQ03060 361 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 GLRA4Q5JXX5 417 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 MPZL3Q6UWV2 235 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 TAS1R3Q7RTX0 852 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 HASPINQ8TF76 798 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 FBXL18Q96ME1 805 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 REEP2Q9BRK0 252 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 SFXN1Q9H9B4 322 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.28■□□□□ 0.68
NUP50-208ENST00000430547 ANKFY1Q9P2R3 1169 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 CACNG4Q9UBN1 327 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 CCDC39Q9UFE4 941 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 MUTYHQ9UIF7 546 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 NR2E1Q9Y466 385 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 PDCD11Q14690 1871 aaKnown RBP19.28■□□□□ 0.68
NUP50-208ENST00000430547 C2orf16Q68DN1 1984 aa19.28■□□□□ 0.68
NUP50-208ENST00000430547 GPR37L1O60883 481 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 LILRB3O75022 631 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 TBCAO75347 108 aaKnown RBP19.27■□□□□ 0.68
NUP50-208ENST00000430547 MCF2P10911 925 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 COL9A1P20849 921 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 MATR3P43243 847 aaKnown RBP eCLIP19.27■□□□□ 0.68
NUP50-208ENST00000430547 MCM6Q14566 821 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 PTPAQ15257 358 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 ATAT1Q5SQI0 421 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 KIAA0319Q5VV43 1072 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 FAM173BQ6P4H8 233 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 C12orf76Q8N812 135 aaPredicted RBP19.27■□□□□ 0.68
NUP50-208ENST00000430547 CEP120Q8N960 986 aa19.27■□□□□ 0.68
NUP50-208ENST00000430547 TMEM161BQ8NDZ6 487 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms