RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 CATSPER3Q86XQ3 398 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 PRELID2Q8N945 189 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 PLEKHG4BQ96PX9 1271 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 DNM3Q9UQ16 869 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 CAPN9O14815 690 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 NR3C1P04150 777 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 FAM163BP0C2L3 166 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 CCDC15Q0P6D6 951 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 GIT2Q14161 759 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 RRP1BQ14684 758 aaKnown RBP18.66■□□□□ 0.58
PMS1-206ENST00000418224 EPHA7Q15375 998 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 PPP1R18Q6NYC8 613 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 ARHGEF18Q6ZSZ5 1173 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 ROPN1BQ9BZX4 212 aaPredicted RBP18.66■□□□□ 0.58
PMS1-206ENST00000418224 TAOK3Q9H2K8 898 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 ZWILCHQ9H900 591 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 ROPN1Q9HAT0 212 aaPredicted RBP18.66■□□□□ 0.58
PMS1-206ENST00000418224 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 PARP2Q9UGN5 583 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 MAGEA13PA6NCF6 341 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 SFI1A8K8P3 1242 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 PHF2O75151 1096 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 SLURP2P0DP57 97 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 MARK3P27448 753 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 KCNA1Q09470 495 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 MKRN3Q13064 507 aaKnown RBP18.66■□□□□ 0.58
PMS1-206ENST00000418224 CTTNQ14247 550 aaKnown RBP18.66■□□□□ 0.58
PMS1-206ENST00000418224 KYNUQ16719 465 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 DPY19L2P1Q6NXN4 242 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 RUNDC3BQ96NL0 473 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 CARD9Q9H257 536 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 IKZF4Q9H2S9 585 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 RHBDL2Q9NX52 303 aa18.66■□□□□ 0.58
PMS1-206ENST00000418224 SPAG7O75391 227 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 SETSIPP0DME0 302 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 MARCKSL1P49006 195 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 CNPY1Q3B7I2 92 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 AMIGO3Q86WK7 504 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 CTNNBL1Q8WYA6 563 aaPredicted RBP18.65■□□□□ 0.58
PMS1-206ENST00000418224 INPP5DQ92835 1189 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 ANO3Q9BYT9 981 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 PCDHA1Q9Y5I3 950 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 SIGLEC16A6NMB1 481 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 TULP1O00294 542 aaPredicted RBP18.65■□□□□ 0.58
PMS1-206ENST00000418224 RPS6KA4O75676 772 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 SNHG28P0DPA3 235 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 ATP5DP30049 168 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 HOXD13P35453 343 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 STRN3Q13033 797 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 CALCOCO2Q13137 446 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 RFX8Q6ZV50 586 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 SPIRE2Q8WWL2 714 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 ARHGEF26Q96DR7 871 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 SERPINB12Q96P63 405 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 VCX3BQ9H321 246 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 VCX3AQ9NNX9 186 aa18.65■□□□□ 0.58
PMS1-206ENST00000418224 PRKCIP41743 596 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 STAT1P42224 750 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 RASSF2P50749 326 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 ACVR2BQ13705 512 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 TAF1BQ53T94 588 aaPredicted RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 ZC3H3Q8IXZ2 948 aaKnown RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 ZDHHC14Q8IZN3 488 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 KRT35Q92764 455 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 RPGRQ92834 1020 aaKnown RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 PTPRN2Q92932 1015 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 CHORDC1Q9UHD1 332 aaPredicted RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 PHTF1Q9UMS5 762 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 TRAF3IP3Q9Y228 551 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 CNTNAP4Q9C0A0 1308 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 PODXLO00592 558 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 TBCAO75347 108 aaKnown RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 CHRNA3P32297 505 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 RBM26Q5T8P6 1007 aaKnown RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 PPFIBP2Q8ND30 876 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.57
PMS1-206ENST00000418224 SLC35C1Q96A29 364 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 DYDC2Q96IM9 177 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 SIX2Q9NPC8 291 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 ATXN10Q9UBB4 475 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 SUGT1Q9Y2Z0 365 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
PMS1-206ENST00000418224 A0A0A6YYK5 440 aaPredicted RBP18.63■□□□□ 0.57
PMS1-206ENST00000418224 A0A1W2PRG0 241 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 TCRBV7S2A1N4TA0A589 114 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 RPL13P26373 211 aaKnown RBP18.63■□□□□ 0.57
PMS1-206ENST00000418224 CCNFP41002 786 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 NOVP48745 357 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 SNAP25P60880 206 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 LRRC74BQ6ZQY2 392 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 C4orf50Q6ZRC1 276 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 SDCCAG8Q86SQ7 713 aaPredicted RBP18.63■□□□□ 0.57
PMS1-206ENST00000418224 MYLK4Q86YV6 388 aaPredicted RBP18.63■□□□□ 0.57
PMS1-206ENST00000418224 ERMNQ8TAM6 284 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 LNX1Q8TBB1 728 aaPredicted RBP18.63■□□□□ 0.57
PMS1-206ENST00000418224 GRAMD1AQ96CP6 724 aa18.63■□□□□ 0.57
PMS1-206ENST00000418224 BHMT2Q9H2M3 363 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms