RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 PARVAQ9NVD7 372 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 TEX33O43247 280 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 SESN2P58004 480 aaPredicted RBP18.11■□□□□ 0.49
COL4A2-201ENST00000360467 EFCAB12Q6NXP0 572 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 UBA3Q8TBC4 463 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 NEUROG2Q9H2A3 272 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 TXLNGQ9NUQ3 528 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 AIPL1Q9NZN9 384 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 UBE2Q2LH0YL09 131 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 NDUFB10O96000 172 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 PROM2Q8N271 834 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 SRPK1Q96SB4 655 aaKnown RBP18.11■□□□□ 0.49
COL4A2-201ENST00000360467 TRIM55Q9BYV6 548 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 APOBEC2Q9Y235 224 aaKnown RBP18.11■□□□□ 0.49
COL4A2-201ENST00000360467 DDHD2O94830 711 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 ATP6V1E1P36543 226 aa18.11■□□□□ 0.49
COL4A2-201ENST00000360467 CDR2LQ86X02 465 aaPredicted RBP18.11■□□□□ 0.49
COL4A2-201ENST00000360467 SPATS2Q86XZ4 545 aaKnown RBP18.11■□□□□ 0.49
COL4A2-201ENST00000360467 NPTXRO95502 500 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 CHRNA3P32297 505 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 SLC8A1P32418 973 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 MAP2K2P36507 400 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 PPP3CCP48454 512 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 RAD51Q06609 339 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 RGS9BPQ6ZS82 235 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 TTC13Q8NBP0 860 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 KATNAL1Q9BW62 490 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 FGFR1OP2Q9NVK5 253 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 CEP55Q53EZ4 464 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 EFHBQ8N7U6 833 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 SYT2Q8N9I0 419 aaPredicted RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 UBE2Q2Q8WVN8 375 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 POLR3CQ9BUI4 534 aaPredicted RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 DDX47Q9H0S4 455 aaKnown RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 UPF3AQ9H1J1 476 aaKnown RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 ADA2Q9NZK5 511 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 CTIFO43310 598 aaKnown RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 KCNA2P16389 499 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 PMS2P54278 862 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 SPARCL1Q14515 664 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 PABPC5Q96DU9 382 aaKnown RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 SH3BP1Q9Y3L3 701 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 PODXLO00592 558 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 MAPK13O15264 365 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 GTF2H3Q13889 308 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 CASP8Q14790 479 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 TNIP3Q96KP6 325 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 CNOT10Q9H9A5 744 aaKnown RBP18.1■□□□□ 0.49
COL4A2-201ENST00000360467 TEKT2Q9UIF3 430 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 KPNA7A9QM74 516 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 GOLGA8RI6L899 631 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 EPHA7Q15375 998 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 TAGAPQ8N103 731 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 GLI2P10070 1586 aa18.1■□□□□ 0.49
COL4A2-201ENST00000360467 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 EIF3EP60228 445 aaKnown RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 CUL1Q13616 776 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 EMC2Q15006 297 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 KIZQ2M2Z5 673 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 ZC2HC1CQ53FD0 456 aaPredicted RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 BEND6Q5SZJ8 279 aaPredicted RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 IER5Q5VY09 327 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 ATP11CQ8NB49 1132 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 SMARCAD1Q9H4L7 1026 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 MTMR4Q9NYA4 1195 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 ARSEP51690 589 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 BLVRAP53004 296 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 ITPRIPL1Q6GPH6 555 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 C11orf96Q7Z7L8 435 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 TRIM4Q9C037 500 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 LSM7Q9UK45 103 aaKnown RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 SPATA31E1Q6ZUB1 1445 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 H0Y3Z8 333 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 NUDT18Q6ZVK8 323 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 CDKL3Q8IVW4 592 aaPredicted RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 KRT38O76015 456 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 IFNA8P32881 189 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 CLCN6P51797 869 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 TBC1D1Q86TI0 1168 aaPredicted RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 TEX13BQ9BXU2 312 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 TRAPPC3O43617 180 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 FGFR4P22455 802 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 CSE1LP55060 971 aaKnown RBP18.09■□□□□ 0.49
COL4A2-201ENST00000360467 PRKCEQ02156 737 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 GNASQ5JWF2 1037 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 MCEEQ96PE7 176 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 CYP4F11Q9HBI6 524 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 CAPN10Q9HC96 672 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 RNF14Q9UBS8 474 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 JCADQ9P266 1359 aa18.09■□□□□ 0.49
COL4A2-201ENST00000360467 EEF1DP29692 281 aaKnown RBP18.08■□□□□ 0.49
COL4A2-201ENST00000360467 USP11P51784 963 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 NCAPHQ15003 741 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 ATG9AQ7Z3C6 839 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 PPHLN1Q8NEY8 458 aaKnown RBP18.08■□□□□ 0.49
COL4A2-201ENST00000360467 KRT7P08729 469 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 SEZ6Q53EL9 994 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 NEDD1Q8NHV4 660 aa18.08■□□□□ 0.49
COL4A2-201ENST00000360467 ATN1P54259 1190 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms