RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 ALG6Q9Y672 507 aa16.83■□□□□ 0.28
TSC22D3-201ENST00000315660 LCTP09848 1927 aa16.83■□□□□ 0.28
TSC22D3-201ENST00000315660 A0A087WUV0 522 aaPredicted RBP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 ZNF233A6NK53 670 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 EIF3HO15372 352 aaKnown RBP eCLIP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 USP2O75604 605 aaPredicted RBP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 SCP2P22307 547 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 ICAM3P32942 547 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 LIG4P49917 911 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 CNTN2Q02246 1040 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 STRN3Q13033 797 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 R3HDM1Q15032 1099 aaKnown RBP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 SKIDA1Q1XH10 827 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 ENOSF1Q7L5Y1 443 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 ZNF526Q8TF50 670 aaPredicted RBP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 UTP11Q9Y3A2 253 aaKnown RBP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 EBAG9O00559 213 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 MMEP08473 750 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 ATP4AP20648 1035 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 GNGT1P63211 74 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 FMO1Q01740 532 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 FSTL1Q12841 308 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 EMC2Q15006 297 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 IQCKQ8N0W5 287 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 GPC2Q8N158 579 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 PROCA1Q8NCQ7 364 aaPredicted RBP16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 MORC4Q8TE76 937 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 FAM213AQ9BRX8 229 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
TSC22D3-201ENST00000315660 LOC285556D6RIA3 1793 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ZC3H11AO75152 810 aaKnown RBP eCLIP16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ATG7O95352 703 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 CYP11B1P15538 503 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ECHS1P30084 290 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 TREML2Q5T2D2 321 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ALG3Q92685 438 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 LRRC45Q96CN5 670 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 RPS6KC1Q96S38 1066 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ZNF302Q9NR11 478 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 MAFBQ9Y5Q3 323 aaPredicted RBP16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 SYNGAP1Q96PV0 1343 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 EXTL3O43909 919 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 HSPA9P38646 679 aaKnown RBP16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 CDR2Q01850 454 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 GCNT1Q02742 428 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 VGLL4Q14135 290 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ICE2Q659A1 982 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 BCAS4Q8TDM0 211 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 TATDN2Q93075 761 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 ELMO3Q96BJ8 720 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 FBXO40Q9UH90 709 aa16.81■□□□□ 0.28
TSC22D3-201ENST00000315660 WDR90Q96KV7 1748 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 KIAA0391O15091 583 aaKnown RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 PEX10O60683 326 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 MTA2O94776 668 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 OATP04181 439 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 PTENP60484 403 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 LBX2Q6XYB7 198 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 SEPT14Q6ZU15 432 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 DDX42Q86XP3 938 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 SLC7A3Q8WY07 619 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 PIK3R5Q8WYR1 880 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 TMEM143Q96AN5 459 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 RAB17Q9H0T7 212 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 CHORDC1Q9UHD1 332 aaPredicted RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 NR2E1Q9Y466 385 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 A6NNZ2 444 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 TMEM110-MUSTN1A8MSY1 372 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 TTI1O43156 1089 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 HSPA6P17066 643 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 ALDH5A1P51649 535 aaPredicted RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 ZNF211Q13398 564 aaPredicted RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 TUBB8Q3ZCM7 444 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 NAA35Q5VZE5 725 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 CD302Q8IX05 232 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 DHX38Q92620 1227 aaKnown RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 ARL8AQ96BM9 186 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 DHX33Q9H6R0 707 aaKnown RBP16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 FAM114A2Q9NRY5 505 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 GTF3C4Q9UKN8 822 aa16.8■□□□□ 0.28
TSC22D3-201ENST00000315660 UTRNP46939 3433 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 ATMINO43313 823 aaPredicted RBP16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 KRT14P02533 472 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 KRT5P13647 590 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 SKOR1P84550 965 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 MESDQ14696 234 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 TTMPQ5BVD1 217 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 DEPTORQ8TB45 409 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 ZNF564Q8TBZ8 553 aaPredicted RBP16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 ASAP3Q8TDY4 903 aa16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 DDX1Q92499 740 aaKnown RBP16.79■□□□□ 0.28
TSC22D3-201ENST00000315660 ZNF516Q92618 1163 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms