RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 PEX10O60683 326 aa16.79■□□□□ 0.28
CGGBP1-201ENST00000309534 CLTAP09496 248 aa16.79■□□□□ 0.28
CGGBP1-201ENST00000309534 MORC4Q8TE76 937 aa16.79■□□□□ 0.28
CGGBP1-201ENST00000309534 MAIP1Q8WWC4 291 aa16.79■□□□□ 0.28
CGGBP1-201ENST00000309534 RHOXF2BP0C7M4 288 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 GPC5P78333 572 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 SGSM1Q2NKQ1 1148 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 ZNF699Q32M78 642 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 C8orf74Q6P047 294 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 ZNF410Q86VK4 478 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 TRIM50Q86XT4 487 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 ZNF653Q96CK0 615 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 PMM2O15305 246 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 PJA2O43164 708 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 CLCN3P51790 818 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 SP2Q02086 613 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 ZNF792Q3KQV3 632 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 MFSD14AQ96MC6 490 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 RTN2O75298 545 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 PLEKP08567 350 aaPredicted RBP16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 MYBL1P10243 752 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 DCAF4L1Q3SXM0 396 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 WDR49Q8IV35 697 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 CD302Q8IX05 232 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 MRPL47Q9HD33 250 aaKnown RBP16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 DNAJC25-GNG10A0A024R161 153 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 THAP12O43422 761 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 CAPSQ13938 189 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 COPS5Q92905 334 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 APBA2Q99767 749 aa16.78■□□□□ 0.28
CGGBP1-201ENST00000309534 KCNK3O14649 394 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 TMEM253P0C7T8 217 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 OSTNP61366 133 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 NCOA4Q13772 614 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 REM2Q8IYK8 340 aaPredicted RBP16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 MAML3Q96JK9 1138 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 NAGPAQ9UK23 515 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 CTIFO43310 598 aaKnown RBP16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 GRIK4Q16099 956 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 PDE11AQ9HCR9 933 aa16.77■□□□□ 0.28
CGGBP1-201ENST00000309534 DICER1Q9UPY3 1922 aaKnown RBP16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 PALMO75781 387 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 CYP2C9P11712 490 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 CBWD6Q4V339 395 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 CBWD3Q5JTY5 395 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 CBWD5Q5RIA9 395 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 SV2AQ7L0J3 742 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 BSNDQ8WZ55 320 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 ACAP3Q96P50 834 aa16.77■□□□□ 0.27
CGGBP1-201ENST00000309534 MIF4GDA9UHW6 222 aaKnown RBP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 EPHB6O15197 1021 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 HOXD13P35453 343 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 GCNT1Q02742 428 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 IRX2Q9BZI1 471 aaPredicted RBP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 IGKV6D-21A0A0A0MT36 114 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 MCF2P10911 925 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 IRF5Q13568 498 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 GRB14Q14449 540 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 PCBP1Q15365 356 aaKnown RBP eCLIP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 IPO4Q8TEX9 1081 aaKnown RBP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 PCDHB2Q9Y5E7 798 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 LOXHD1Q8IVV2 1947 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 A0A087X0T9 212 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 A0A0A6YYK5 440 aaPredicted RBP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 RNF225M0QZC1 329 aaPredicted RBP16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 FAM228BP0C875 321 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 GJB7Q6PEY0 223 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 SCINQ9Y6U3 715 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 PIGRP01833 764 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 AKR1A1P14550 325 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 PPP1R16BQ96T49 567 aa16.76■□□□□ 0.27
CGGBP1-201ENST00000309534 ADRB2P07550 413 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 HSPA6P17066 643 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 SLC8A3P57103 927 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 TLK2Q86UE8 772 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 GJA5P36382 358 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 IFT20Q8IY31 132 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 BEST2Q8NFU1 509 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 SNX12Q9UMY4 172 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 GRID2IPA4D2P6 1211 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 FOXN3O00409 490 aaPredicted RBP16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 CYP26A1O43174 497 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 ZNF286BP0CG31 522 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 PRLRP16471 622 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 DCUN1D2Q6PH85 259 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 FIZ1Q96SL8 496 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 STRA6Q9BX79 667 aa16.75■□□□□ 0.27
CGGBP1-201ENST00000309534 TISP43B9A030 160 aa16.74■□□□□ 0.27
CGGBP1-201ENST00000309534 LCA5LO95447 670 aa16.74■□□□□ 0.27
CGGBP1-201ENST00000309534 RARBP10826 455 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms