RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Rnf25Q9QZR0 456 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Efna5O08543 228 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Folh1O35409 752 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Nap1l1P28656 391 aaKnown RBP17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 TxkP42682 527 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cdkn2aipQ8BI72 563 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ccser1Q8C0C4 895 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Prpf4Q9DAW6 521 aaKnown RBP17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Wdr72D3YYM4 1114 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Mgat1P27808 447 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 AdkP55264 361 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Zhx1P70121 873 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Klra5Q60652 266 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Fhod1Q6P9Q4 1197 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Kcnt1Q6ZPR4 1224 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Sdad1Q80UZ2 687 aaKnown RBP17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Hdhd5Q91WM2 419 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 MesdQ9ERE7 224 aa17.06■□□□□ 0.32
Trim39-203ENSMUST00000113706 Myh10Q61879 1976 aaKnown RBP17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 TxnP10639 105 aaKnown RBP17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Clcn3P51791 818 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 PrkcbP68404 671 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 MlxipQ2VPU4 917 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Hdhd2Q3UGR5 259 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Nat8lQ3UGX3 299 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Upb1Q8VC97 393 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Erlin1Q91X78 346 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Katnbl1Q9CWJ3 299 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Castor1Q9CWQ8 331 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Arl2bpQ9D385 163 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gm3127E9Q9P5 263 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Sec24cG3X972 1096 aaKnown RBP17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gm3453K7N724 263 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Mtco1P00397 514 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Haus1Q8BHX1 278 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Nup58Q8R332 587 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ces1fQ91WU0 561 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Tlr3Q99MB1 905 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Dis3Q9CSH3 958 aaKnown RBP17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 IscuQ9D7P6 168 aa17.05■□□□□ 0.32
Trim39-203ENSMUST00000113706 Smim10l2aA0A0B4J1F8 78 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ccr1P51675 355 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Tpd52Q62393 224 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Znf219Q6IQX8 726 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Elac2Q80Y81 831 aaKnown RBP17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Olfr1499Q8VG65 314 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Acsl3Q9CZW4 720 aaKnown RBP17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gon4lQ9DB00 2260 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Akr1b10G5E895 316 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Tnfrsf18O35714 228 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 CraddO88843 199 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Etaa1Q5SVT3 877 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 E2f5Q61502 335 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Llgl1Q80Y17 1036 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gnl3Q8CI11 538 aaKnown RBP17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Smyd3Q9CWR2 428 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gtf3c6Q9D8P7 227 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Fut8Q9WTS2 575 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Pacsin2Q9WVE8 486 aaKnown RBP17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Prr14lE9Q7C4 1971 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Usp34Q6ZQ93 3582 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Arrdc4A0A0B4J1F4 415 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Becn2P0DM65 447 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Igfbp4P47879 254 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cdc25cP48967 447 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Klra7Q60654 280 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 B3glctQ8BHT6 489 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ablim1Q8K4G5 861 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cfap57Q9D180 1249 aa17.04■□□□□ 0.32
Trim39-203ENSMUST00000113706 Pgk2P09041 417 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rnf157Q3TEL6 685 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 SpdyaQ5IBH7 310 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Specc1Q5SXY1 1067 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 FAM120AQ6A0A9 1112 aaKnown RBP17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Krt42Q6IFX2 452 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Klhl7Q8BUL5 586 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rpp40Q8R1F9 363 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Wfdc16A2A5H4 111 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ap1m1P35585 423 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gdpd4Q3TT99 632 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Snx27Q3UHD6 539 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cd180Q62192 661 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 GlmnQ8BZM1 596 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ccdc87Q8CDL9 855 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 LrmdaQ9D9B4 229 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 B4galt5Q9JMK0 388 aa17.03■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ttc13A0A1L1SSC7 844 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cdr2lA2A6T1 465 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ttc39dQ0VF76 604 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ice2Q3UZ18 988 aaKnown RBP17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Cfap100Q80VN0 613 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 DcakdQ8BHC4 231 aaKnown RBP17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Rasgef1cQ9D300 466 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Olfr456B2RT27 312 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Gm2030D3Z7C4 212 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Mucl2P02815 138 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Ift20Q61025 132 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Slain1Q68FF7 579 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 MafaQ8CF90 359 aa17.02■□□□□ 0.32
Trim39-203ENSMUST00000113706 Lrrc56Q8K375 552 aa17.02■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms