Protein–RNA interactions for Protein: Q62192

Cd180, CD180 antigen, mousemouse

Predictions only

Length 661 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd180Q62192 Gm25239-201ENSMUST00000174915 86 ntBASIC41.45■■■■■ 4.23
Cd180Q62192 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
Cd180Q62192 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
Cd180Q62192 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
Cd180Q62192 Gm15042-201ENSMUST00000120212 883 ntBASIC36.41■■■■□ 3.42
Cd180Q62192 Gm24109-201ENSMUST00000175489 103 ntBASIC35.83■■■■□ 3.33
Cd180Q62192 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Cd180Q62192 Gm15045-201ENSMUST00000117359 883 ntBASIC35.63■■■■□ 3.29
Cd180Q62192 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.37■■■■□ 3.25
Cd180Q62192 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Cd180Q62192 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.97■■■■□ 3.19
Cd180Q62192 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Cd180Q62192 Gm23366-201ENSMUST00000175022 89 ntBASIC34.64■■■■□ 3.14
Cd180Q62192 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Cd180Q62192 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Cd180Q62192 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.1■■■■□ 3.05
Cd180Q62192 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Cd180Q62192 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
Cd180Q62192 Psd-208ENSMUST00000224556 2034 ntBASIC33.74■■■□□ 2.99
Cd180Q62192 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Cd180Q62192 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Cd180Q62192 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Cd180Q62192 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
Cd180Q62192 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.53■■■□□ 2.96
Cd180Q62192 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.5■■■□□ 2.95
Cd180Q62192 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.43■■■□□ 2.94
Cd180Q62192 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Cd180Q62192 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.31■■■□□ 2.92
Cd180Q62192 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
Cd180Q62192 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.18■■■□□ 2.9
Cd180Q62192 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.96■■■□□ 2.87
Cd180Q62192 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cd180Q62192 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cd180Q62192 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cd180Q62192 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.78■■■□□ 2.84
Cd180Q62192 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Cd180Q62192 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Cd180Q62192 Gm25238-201ENSMUST00000174914 89 ntBASIC32.67■■■□□ 2.82
Cd180Q62192 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.61■■■□□ 2.81
Cd180Q62192 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Cd180Q62192 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cd180Q62192 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Cd180Q62192 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.18■■■□□ 2.74
Cd180Q62192 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Cd180Q62192 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Cd180Q62192 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cd180Q62192 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cd180Q62192 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
Cd180Q62192 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.99■■■□□ 2.71
Cd180Q62192 Gm27325-201ENSMUST00000175467 74 ntBASIC31.94■■■□□ 2.7
Cd180Q62192 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.93■■■□□ 2.7
Cd180Q62192 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cd180Q62192 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cd180Q62192 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cd180Q62192 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Cd180Q62192 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.66■■■□□ 2.66
Cd180Q62192 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.62■■■□□ 2.65
Cd180Q62192 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.58■■■□□ 2.65
Cd180Q62192 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
Cd180Q62192 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cd180Q62192 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cd180Q62192 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cd180Q62192 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cd180Q62192 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.45■■■□□ 2.63
Cd180Q62192 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.45■■■□□ 2.63
Cd180Q62192 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cd180Q62192 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cd180Q62192 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cd180Q62192 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cd180Q62192 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cd180Q62192 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cd180Q62192 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Cd180Q62192 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cd180Q62192 Rab21-202ENSMUST00000218831 843 ntBASIC31.23■■■□□ 2.59
Cd180Q62192 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cd180Q62192 Gm25262-201ENSMUST00000174934 133 ntBASIC31.18■■■□□ 2.58
Cd180Q62192 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.11■■■□□ 2.57
Cd180Q62192 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.08■■■□□ 2.57
Cd180Q62192 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.07■■■□□ 2.56
Cd180Q62192 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cd180Q62192 Gm42596-201ENSMUST00000196305 1958 ntBASIC31■■■□□ 2.55
Cd180Q62192 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cd180Q62192 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Cd180Q62192 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Cd180Q62192 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cd180Q62192 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.82■■■□□ 2.52
Cd180Q62192 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cd180Q62192 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Cd180Q62192 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cd180Q62192 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cd180Q62192 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.73■■■□□ 2.51
Cd180Q62192 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.63■■■□□ 2.49
Cd180Q62192 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cd180Q62192 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cd180Q62192 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.59■■■□□ 2.49
Cd180Q62192 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.53■■■□□ 2.48
Cd180Q62192 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Cd180Q62192 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Cd180Q62192 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Cd180Q62192 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.47■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 192.6 ms