Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Gm25239-201ENSMUST00000174915 86 ntBASIC42.78■■■■■ 4.44
Mtco1P00397 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.59■■■■□ 3.93
Mtco1P00397 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
Mtco1P00397 Gm15042-201ENSMUST00000120212 883 ntBASIC37.33■■■■□ 3.57
Mtco1P00397 Gm24109-201ENSMUST00000175489 103 ntBASIC37.08■■■■□ 3.53
Mtco1P00397 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Mtco1P00397 Gm15045-201ENSMUST00000117359 883 ntBASIC36.5■■■■□ 3.43
Mtco1P00397 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Mtco1P00397 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.09■■■■□ 3.37
Mtco1P00397 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Mtco1P00397 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Mtco1P00397 Gm23366-201ENSMUST00000175022 89 ntBASIC35.7■■■■□ 3.31
Mtco1P00397 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Mtco1P00397 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.35■■■■□ 3.25
Mtco1P00397 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Mtco1P00397 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Mtco1P00397 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.63■■■■□ 3.13
Mtco1P00397 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.46■■■■□ 3.11
Mtco1P00397 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.46■■■■□ 3.11
Mtco1P00397 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.43■■■■□ 3.1
Mtco1P00397 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.41■■■■□ 3.1
Mtco1P00397 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Mtco1P00397 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.24■■■■□ 3.07
Mtco1P00397 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
Mtco1P00397 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34■■■■□ 3.03
Mtco1P00397 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Mtco1P00397 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Mtco1P00397 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Mtco1P00397 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Mtco1P00397 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Mtco1P00397 Gm25238-201ENSMUST00000174914 89 ntBASIC33.79■■■■□ 3
Mtco1P00397 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Mtco1P00397 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Mtco1P00397 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.72■■■□□ 2.99
Mtco1P00397 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.71■■■□□ 2.99
Mtco1P00397 Psd-208ENSMUST00000224556 2034 ntBASIC33.58■■■□□ 2.97
Mtco1P00397 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Mtco1P00397 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.08■■■□□ 2.89
Mtco1P00397 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.06■■■□□ 2.88
Mtco1P00397 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Mtco1P00397 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.91■■■□□ 2.86
Mtco1P00397 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Mtco1P00397 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Mtco1P00397 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Mtco1P00397 Gm27325-201ENSMUST00000175467 74 ntBASIC32.7■■■□□ 2.83
Mtco1P00397 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Mtco1P00397 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Mtco1P00397 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.65■■■□□ 2.82
Mtco1P00397 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
Mtco1P00397 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.51■■■□□ 2.79
Mtco1P00397 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.44■■■□□ 2.78
Mtco1P00397 Gm25262-201ENSMUST00000174934 133 ntBASIC32.36■■■□□ 2.77
Mtco1P00397 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Mtco1P00397 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Mtco1P00397 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.3■■■□□ 2.76
Mtco1P00397 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.23■■■□□ 2.75
Mtco1P00397 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Mtco1P00397 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Mtco1P00397 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Mtco1P00397 Rab21-202ENSMUST00000218831 843 ntBASIC32.12■■■□□ 2.73
Mtco1P00397 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.03■■■□□ 2.72
Mtco1P00397 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Mtco1P00397 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Mtco1P00397 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.89■■■□□ 2.7
Mtco1P00397 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Mtco1P00397 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Mtco1P00397 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.79■■■□□ 2.68
Mtco1P00397 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Mtco1P00397 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
Mtco1P00397 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
Mtco1P00397 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.75■■■□□ 2.67
Mtco1P00397 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.74■■■□□ 2.67
Mtco1P00397 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.74■■■□□ 2.67
Mtco1P00397 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Mtco1P00397 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Mtco1P00397 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Mtco1P00397 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Mtco1P00397 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Mtco1P00397 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Mtco1P00397 Gm26115-201ENSMUST00000175605 87 ntBASIC31.56■■■□□ 2.64
Mtco1P00397 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Mtco1P00397 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Mtco1P00397 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Mtco1P00397 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.5■■■□□ 2.63
Mtco1P00397 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Mtco1P00397 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Mtco1P00397 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
Mtco1P00397 Gm8109-201ENSMUST00000194076 746 ntBASIC31.43■■■□□ 2.62
Mtco1P00397 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Mtco1P00397 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Mtco1P00397 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Mtco1P00397 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.36■■■□□ 2.61
Mtco1P00397 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Mtco1P00397 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.3■■■□□ 2.6
Mtco1P00397 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.28■■■□□ 2.6
Mtco1P00397 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.25■■■□□ 2.59
Mtco1P00397 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.22■■■□□ 2.59
Mtco1P00397 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.18■■■□□ 2.58
Mtco1P00397 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Mtco1P00397 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 562.9 ms