RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	STF1	P01098	86 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	RPL31A	P0C2H8	113 aa	Known RBP	0.49	□□□□□ -2.33
SEC8	YPR055W	ACB1	P31787	87 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	IMP3	P32899	183 aa	Predicted RBP	0.49	□□□□□ -2.33
SEC8	YPR055W	MCH2	P36032	473 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	MED8	P38304	223 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	VAB2	P40003	282 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	OSW5	P40219	148 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	SYS1	P41544	203 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	BUD13	P46947	266 aa	Predicted RBP	0.49	□□□□□ -2.33
SEC8	YPR055W	DTD1	Q07648	150 aa	Known RBP	0.49	□□□□□ -2.33
SEC8	YPR055W	APC9	Q12107	265 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	POM33	Q12164	279 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	PRR2	Q12310	699 aa		0.49	□□□□□ -2.33
SEC8	YPR055W	OPI1	P21957	404 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	YSR3	P23501	404 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	COT1	P32798	439 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	SEN34	P39707	275 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	INA22	P40576	216 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	DSK2	P48510	373 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	HSH155	P49955	971 aa	Known RBP	0.48	□□□□□ -2.33
SEC8	YPR055W	SWT21	P53873	357 aa	Predicted RBP	0.48	□□□□□ -2.33
SEC8	YPR055W	YLR446W	Q06204	433 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	TIM22	Q12328	207 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	TRM732	Q03496	1420 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	BEM2	P39960	2167 aa	Known RBP	0.48	□□□□□ -2.33
SEC8	YPR055W	FKS1	P38631	1876 aa	Known RBP	0.48	□□□□□ -2.33
SEC8	YPR055W	CDC37	P06101	506 aa	Known RBP	0.48	□□□□□ -2.33
SEC8	YPR055W	YOL163W	P0CF20	169 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	CSE1	P33307	960 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	SWD2	P36104	329 aa	Predicted RBP	0.48	□□□□□ -2.33
SEC8	YPR055W	MRPL3	P36516	390 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	MBA1	P38300	278 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	YHR035W	P38769	630 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	PCL7	P40186	285 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	UBC13	P52490	153 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	MAL13	P53338	473 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	YPL039W	Q03080	316 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	NNT1	Q05874	261 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	YOR114W	Q12219	294 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	YHR086W-A	Q3E746	53 aa		0.48	□□□□□ -2.33
SEC8	YPR055W	ATG15	P25641	520 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	RPS0A	P32905	252 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	SPT4	P32914	102 aa	Predicted RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	UIP5	P36137	443 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	CAJ1	P39101	391 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	KRE29	P40026	464 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YFL064C	P43540	174 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YJR146W	P47174	117 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	DPP1	Q05521	289 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	RRP42	Q12277	265 aa	Predicted RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	ATG5	Q12380	294 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YSP2	Q06681	1438 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	RAD10	P06838	210 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	RPL4A	P10664	362 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	GPI12	P23797	304 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	CSM1	P25651	190 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	COY1	P34237	679 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	ATG12	P38316	186 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	POP2	P39008	433 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	RPL4B	P49626	362 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	BIO4	P53630	237 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YNL095C	P53932	642 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	PRO2	P54885	456 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	VPS20	Q04272	221 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	CUR1	Q06469	252 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	SUE1	Q06524	206 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	ASR1	Q06834	288 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YPR064W	Q12492	139 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	NUP157	P40064	1391 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	USO1	P25386	1790 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	RSA4	P25382	515 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	POP8	P38208	133 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	ARN2	P38724	620 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	SSO2	P39926	295 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	AVT6	P40074	448 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	DAN1	P47178	298 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YGL185C	P53100	379 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	SWC4	P53201	476 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	FMP41	P53889	259 aa	Known RBP	0.47	□□□□□ -2.33
SEC8	YPR055W	REX3	Q12090	404 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	AGC1	Q12482	902 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	YBL112C	Q3E7Y4	105 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	IZH4	Q99393	312 aa		0.47	□□□□□ -2.33
SEC8	YPR055W	APC1	P53886	1748 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	HIS3	P06633	220 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	PHO80	P20052	293 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	PES4	P39684	611 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	PEX31	P53203	462 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	GRH1	Q04410	372 aa	Known RBP	0.46	□□□□□ -2.34
SEC8	YPR055W	CTS2	Q06350	511 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	PLB3	Q08108	686 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	RIM15	P43565	1770 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	YKL063C	P35725	167 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	TRM7	P38238	310 aa	Known RBP	0.46	□□□□□ -2.34
SEC8	YPR055W	PHO89	P38361	574 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	RPE1	P46969	238 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	PNC1	P53184	216 aa	Known RBP	0.46	□□□□□ -2.34
SEC8	YPR055W	YMR209C	Q03648	457 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	LOA1	Q06508	300 aa		0.46	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 332.3 ms