RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C RLP24Q07915 199 aaKnown RBP2.53□□□□□ -2
CCL1YPR025C RPS3P05750 240 aaKnown RBP2.52□□□□□ -2.01
CCL1YPR025C MIG1P27705 504 aa2.52□□□□□ -2.01
CCL1YPR025C SDH4P37298 181 aa2.52□□□□□ -2.01
CCL1YPR025C FMP41P53889 259 aaKnown RBP2.52□□□□□ -2.01
CCL1YPR025C LOA1Q06508 300 aa2.52□□□□□ -2.01
CCL1YPR025C YPL150WQ12152 901 aa2.52□□□□□ -2.01
CCL1YPR025C POF1P25576 258 aa2.51□□□□□ -2.01
CCL1YPR025C ATG12P38316 186 aa2.51□□□□□ -2.01
CCL1YPR025C SPL2P38839 148 aa2.51□□□□□ -2.01
CCL1YPR025C YER084WP40057 128 aa2.51□□□□□ -2.01
CCL1YPR025C LSB1P53281 241 aa2.51□□□□□ -2.01
CCL1YPR025C CDC14Q00684 551 aa2.51□□□□□ -2.01
CCL1YPR025C PER33Q12144 273 aa2.51□□□□□ -2.01
CCL1YPR025C TIM22Q12328 207 aa2.51□□□□□ -2.01
CCL1YPR025C TDH2P00358 332 aaKnown RBP2.5□□□□□ -2.01
CCL1YPR025C KRE1P17260 313 aa2.5□□□□□ -2.01
CCL1YPR025C ERG2P32352 222 aa2.5□□□□□ -2.01
CCL1YPR025C EMC2P47133 292 aaKnown RBP2.5□□□□□ -2.01
CCL1YPR025C SEC10Q06245 871 aa2.5□□□□□ -2.01
CCL1YPR025C YAL064W-BO13512 126 aa2.49□□□□□ -2.01
CCL1YPR025C CAM1P29547 415 aaKnown RBP2.49□□□□□ -2.01
CCL1YPR025C MRPL37P36532 105 aa2.49□□□□□ -2.01
CCL1YPR025C SUR2P38992 349 aa2.49□□□□□ -2.01
CCL1YPR025C SER33P40510 469 aa2.49□□□□□ -2.01
CCL1YPR025C TRM44Q02648 567 aaKnown RBP2.49□□□□□ -2.01
CCL1YPR025C GMC2Q06201 188 aa2.49□□□□□ -2.01
CCL1YPR025C ARV1Q06541 321 aa2.49□□□□□ -2.01
CCL1YPR025C PAN1P32521 1480 aa2.49□□□□□ -2.01
CCL1YPR025C RPP0P05317 312 aaKnown RBP2.48□□□□□ -2.01
CCL1YPR025C RSA4P25382 515 aaKnown RBP2.48□□□□□ -2.01
CCL1YPR025C CAB3P36076 571 aa2.48□□□□□ -2.01
CCL1YPR025C YKR032WP36127 104 aa2.48□□□□□ -2.01
CCL1YPR025C HSM3P38348 480 aa2.48□□□□□ -2.01
CCL1YPR025C ARN2P38724 620 aa2.48□□□□□ -2.01
CCL1YPR025C YER188WP40103 239 aa2.48□□□□□ -2.01
CCL1YPR025C TAD2P47058 250 aa2.48□□□□□ -2.01
CCL1YPR025C TIM21P53220 239 aa2.48□□□□□ -2.01
CCL1YPR025C YNL095CP53932 642 aa2.48□□□□□ -2.01
CCL1YPR025C YPL039WQ03080 316 aa2.48□□□□□ -2.01
CCL1YPR025C SDC1Q03323 175 aa2.48□□□□□ -2.01
CCL1YPR025C FEX1Q08913 375 aa2.48□□□□□ -2.01
CCL1YPR025C FEX2Q08991 375 aa2.48□□□□□ -2.01
CCL1YPR025C NUP157P40064 1391 aaKnown RBP2.48□□□□□ -2.01
CCL1YPR025C SSK22P25390 1331 aaPredicted RBP2.47□□□□□ -2.01
CCL1YPR025C HIS3P06633 220 aa2.47□□□□□ -2.01
CCL1YPR025C RPL4AP10664 362 aaKnown RBP2.47□□□□□ -2.01
CCL1YPR025C MET16P18408 261 aaPredicted RBP2.47□□□□□ -2.01
CCL1YPR025C PEX3P28795 441 aa2.47□□□□□ -2.01
CCL1YPR025C HMT1P38074 348 aa2.47□□□□□ -2.01
CCL1YPR025C YHI9P38765 294 aa2.47□□□□□ -2.01
CCL1YPR025C OST3P48439 350 aa2.47□□□□□ -2.01
CCL1YPR025C RPL4BP49626 362 aaKnown RBP2.47□□□□□ -2.01
CCL1YPR025C KAP95Q06142 861 aaKnown RBP2.47□□□□□ -2.01
CCL1YPR025C CTR3Q06686 241 aa2.47□□□□□ -2.01
CCL1YPR025C YOL019WQ08157 551 aa2.47□□□□□ -2.01
CCL1YPR025C CLP1Q08685 445 aaPredicted RBP2.47□□□□□ -2.01
CCL1YPR025C YOS9Q99220 542 aa2.47□□□□□ -2.01
CCL1YPR025C UTR5P32630 166 aa2.46□□□□□ -2.02
CCL1YPR025C CSG2P35206 410 aa2.46□□□□□ -2.02
CCL1YPR025C RCY1P39531 840 aa2.46□□□□□ -2.02
CCL1YPR025C COA1P40452 197 aa2.46□□□□□ -2.02
CCL1YPR025C PIR5P46999 287 aa2.46□□□□□ -2.02
CCL1YPR025C MNT4P53745 580 aa2.46□□□□□ -2.02
CCL1YPR025C MIX17Q03667 156 aa2.46□□□□□ -2.02
CCL1YPR025C RRT8Q08219 342 aa2.46□□□□□ -2.02
CCL1YPR025C YBL112CQ3E7Y4 105 aa2.46□□□□□ -2.02
CCL1YPR025C ISD11Q6Q560 94 aa2.46□□□□□ -2.02
CCL1YPR025C YEL009C-AA0A023PZF2 135 aa2.45□□□□□ -2.02
CCL1YPR025C HIS1P00498 297 aaKnown RBP2.45□□□□□ -2.02
CCL1YPR025C RPL24AP04449 155 aaKnown RBP2.45□□□□□ -2.02
CCL1YPR025C ZWF1P11412 505 aaKnown RBP2.45□□□□□ -2.02
CCL1YPR025C RPT5P33297 434 aaKnown RBP2.45□□□□□ -2.02
CCL1YPR025C KAP114P53067 1004 aa2.45□□□□□ -2.02
CCL1YPR025C TIM11P81449 96 aaPredicted RBP2.45□□□□□ -2.02
CCL1YPR025C YMR166CQ03829 368 aa2.45□□□□□ -2.02
CCL1YPR025C AI5_BETAQ9ZZX0 354 aa2.45□□□□□ -2.02
CCL1YPR025C YUH1P35127 236 aa2.44□□□□□ -2.02
CCL1YPR025C SHC1P39000 512 aa2.44□□□□□ -2.02
CCL1YPR025C SCC4P40090 624 aa2.44□□□□□ -2.02
CCL1YPR025C YJL118WP47022 219 aa2.44□□□□□ -2.02
CCL1YPR025C NBP35P52920 328 aa2.44□□□□□ -2.02
CCL1YPR025C IGO1P53897 168 aa2.44□□□□□ -2.02
CCL1YPR025C SWS2P53937 143 aa2.44□□□□□ -2.02
CCL1YPR025C RRN5Q02983 363 aa2.44□□□□□ -2.02
CCL1YPR025C RRT12P25381 491 aa2.43□□□□□ -2.02
CCL1YPR025C NPT1P39683 429 aaKnown RBP2.43□□□□□ -2.02
CCL1YPR025C SYF2P53277 215 aaPredicted RBP2.43□□□□□ -2.02
CCL1YPR025C MPP6P53725 186 aaPredicted RBP2.43□□□□□ -2.02
CCL1YPR025C OST6Q03723 332 aa2.43□□□□□ -2.02
CCL1YPR025C FCF1Q05498 189 aaPredicted RBP2.43□□□□□ -2.02
CCL1YPR025C COS2P0CX12 379 aa2.42□□□□□ -2.02
CCL1YPR025C COS3P0CX13 379 aa2.42□□□□□ -2.02
CCL1YPR025C COY1P34237 679 aa2.42□□□□□ -2.02
CCL1YPR025C HEK2P38199 381 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
CCL1YPR025C YHL049CP38722 271 aa2.42□□□□□ -2.02
CCL1YPR025C MED6P38782 295 aa2.42□□□□□ -2.02
CCL1YPR025C PET100P38958 111 aa2.42□□□□□ -2.02
CCL1YPR025C NIF3P53081 288 aa2.42□□□□□ -2.02
CCL1YPR025C MAL13P53338 473 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms