RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W PET117Q02771 107 aa2.78□□□□□ -1.96
TRM112YNR046W YDL144CQ07589 356 aa2.78□□□□□ -1.96
TRM112YNR046W SDO1Q07953 250 aaKnown RBP2.78□□□□□ -1.96
TRM112YNR046W YDL211CQ12121 372 aa2.78□□□□□ -1.96
TRM112YNR046W RUD3Q12234 484 aaKnown RBP2.78□□□□□ -1.96
TRM112YNR046W QCR6P00127 147 aa2.77□□□□□ -1.97
TRM112YNR046W RPP0P05317 312 aaKnown RBP2.77□□□□□ -1.97
TRM112YNR046W RPL4AP10664 362 aaKnown RBP2.77□□□□□ -1.97
TRM112YNR046W CUP2P15315 225 aa2.77□□□□□ -1.97
TRM112YNR046W PHO80P20052 293 aa2.77□□□□□ -1.97
TRM112YNR046W RPB9P27999 122 aa2.77□□□□□ -1.97
TRM112YNR046W SRB4P32569 687 aa2.77□□□□□ -1.97
TRM112YNR046W IME2P32581 645 aa2.77□□□□□ -1.97
TRM112YNR046W CAT2P32796 670 aaKnown RBP2.77□□□□□ -1.97
TRM112YNR046W ATG12P38316 186 aa2.77□□□□□ -1.97
TRM112YNR046W DED81P38707 554 aaKnown RBP2.77□□□□□ -1.97
TRM112YNR046W YHI9P38765 294 aa2.77□□□□□ -1.97
TRM112YNR046W TRR2P38816 342 aa2.77□□□□□ -1.97
TRM112YNR046W RPL4BP49626 362 aaKnown RBP2.77□□□□□ -1.97
TRM112YNR046W MAL13P53338 473 aa2.77□□□□□ -1.97
TRM112YNR046W NNT1Q05874 261 aa2.77□□□□□ -1.97
TRM112YNR046W BOP2Q06150 570 aa2.77□□□□□ -1.97
TRM112YNR046W PAM18Q07914 168 aa2.77□□□□□ -1.97
TRM112YNR046W TY3A-GQ12173 290 aa2.77□□□□□ -1.97
TRM112YNR046W YOR029WQ12243 111 aa2.77□□□□□ -1.97
TRM112YNR046W TY3A-IQ99219 290 aa2.77□□□□□ -1.97
TRM112YNR046W RNA15P25299 296 aaPredicted RBP2.76□□□□□ -1.97
TRM112YNR046W YCR025CP25352 136 aa2.76□□□□□ -1.97
TRM112YNR046W MRX3P38172 270 aa2.76□□□□□ -1.97
TRM112YNR046W PHO89P38361 574 aa2.76□□□□□ -1.97
TRM112YNR046W YIR035CP40579 254 aa2.76□□□□□ -1.97
TRM112YNR046W SYS1P41544 203 aa2.76□□□□□ -1.97
TRM112YNR046W HST4P53688 370 aa2.76□□□□□ -1.97
TRM112YNR046W SMD1Q02260 146 aaPredicted RBP2.76□□□□□ -1.97
TRM112YNR046W ATG31Q12421 196 aa2.76□□□□□ -1.97
TRM112YNR046W YAL063C-AQ3E791 96 aa2.76□□□□□ -1.97
TRM112YNR046W STH1P32597 1359 aa2.75□□□□□ -1.97
TRM112YNR046W ATG15P25641 520 aa2.75□□□□□ -1.97
TRM112YNR046W QRI5P32344 111 aa2.75□□□□□ -1.97
TRM112YNR046W ARO4P32449 370 aaKnown RBP2.75□□□□□ -1.97
TRM112YNR046W POP8P38208 133 aa2.75□□□□□ -1.97
TRM112YNR046W YHL044WP38727 235 aa2.75□□□□□ -1.97
TRM112YNR046W SER33P40510 469 aa2.75□□□□□ -1.97
TRM112YNR046W DSN1P40568 576 aa2.75□□□□□ -1.97
TRM112YNR046W NBP35P52920 328 aa2.75□□□□□ -1.97
TRM112YNR046W SLX9P53251 210 aaPredicted RBP2.75□□□□□ -1.97
TRM112YNR046W SWT21P53873 357 aaPredicted RBP2.75□□□□□ -1.97
TRM112YNR046W SWS2P53937 143 aa2.75□□□□□ -1.97
TRM112YNR046W SDC1Q03323 175 aa2.75□□□□□ -1.97
TRM112YNR046W EBS1Q03466 884 aaKnown RBP2.75□□□□□ -1.97
TRM112YNR046W KRE28Q04431 385 aa2.75□□□□□ -1.97
TRM112YNR046W RNH1Q04740 348 aa2.75□□□□□ -1.97
TRM112YNR046W CSM4Q08955 156 aa2.75□□□□□ -1.97
TRM112YNR046W MSH5Q12175 901 aa2.75□□□□□ -1.97
TRM112YNR046W AI5_BETAQ9ZZX0 354 aa2.75□□□□□ -1.97
TRM112YNR046W YCR016WP25617 290 aaKnown RBP2.74□□□□□ -1.97
TRM112YNR046W ERG2P32352 222 aa2.74□□□□□ -1.97
TRM112YNR046W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
TRM112YNR046W RPE1P46969 238 aa2.74□□□□□ -1.97
TRM112YNR046W UFD1P53044 361 aa2.74□□□□□ -1.97
TRM112YNR046W RSM27P53305 110 aa2.74□□□□□ -1.97
TRM112YNR046W FMP41P53889 259 aaKnown RBP2.74□□□□□ -1.97
TRM112YNR046W PEX10Q05568 337 aa2.74□□□□□ -1.97
TRM112YNR046W YPL150WQ12152 901 aa2.74□□□□□ -1.97
TRM112YNR046W IES3Q12345 250 aa2.74□□□□□ -1.97
TRM112YNR046W SNF8Q12483 233 aa2.74□□□□□ -1.97
TRM112YNR046W MED8P38304 223 aa2.73□□□□□ -1.97
TRM112YNR046W TCD1P38756 429 aa2.73□□□□□ -1.97
TRM112YNR046W NBP1P52919 319 aaPredicted RBP2.73□□□□□ -1.97
TRM112YNR046W TVP15Q03860 143 aa2.73□□□□□ -1.97
TRM112YNR046W YLR283WQ05867 314 aa2.73□□□□□ -1.97
TRM112YNR046W LOA1Q06508 300 aa2.73□□□□□ -1.97
TRM112YNR046W YPL264CQ08980 353 aa2.73□□□□□ -1.97
TRM112YNR046W YPL119C-AQ3E751 87 aa2.73□□□□□ -1.97
TRM112YNR046W POX1P13711 748 aa2.72□□□□□ -1.97
TRM112YNR046W MSN4P33749 630 aa2.72□□□□□ -1.97
TRM112YNR046W JEN1P36035 616 aa2.72□□□□□ -1.97
TRM112YNR046W YER085CP40058 173 aa2.72□□□□□ -1.97
TRM112YNR046W USE1P53146 245 aa2.72□□□□□ -1.97
TRM112YNR046W YNL095CP53932 642 aa2.72□□□□□ -1.97
TRM112YNR046W ASI3P53983 676 aa2.72□□□□□ -1.97
TRM112YNR046W TIM11P81449 96 aaPredicted RBP2.72□□□□□ -1.97
TRM112YNR046W ATG17Q06410 417 aa2.72□□□□□ -1.97
TRM112YNR046W SNU23Q12368 194 aaPredicted RBP2.72□□□□□ -1.97
TRM112YNR046W YAK1P14680 807 aa2.71□□□□□ -1.98
TRM112YNR046W NOP1P15646 327 aaKnown RBP2.71□□□□□ -1.98
TRM112YNR046W HOM6P31116 359 aaKnown RBP2.71□□□□□ -1.98
TRM112YNR046W AST1P35183 429 aa2.71□□□□□ -1.98
TRM112YNR046W CAB3P36076 571 aa2.71□□□□□ -1.98
TRM112YNR046W HMT1P38074 348 aa2.71□□□□□ -1.98
TRM112YNR046W HEK2P38199 381 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98 RIP-Chip
TRM112YNR046W FZO1P38297 855 aa2.71□□□□□ -1.98
TRM112YNR046W SMB1P40018 196 aaKnown RBP2.71□□□□□ -1.98
TRM112YNR046W GCN20P43535 752 aaKnown RBP2.71□□□□□ -1.98
TRM112YNR046W HSH155P49955 971 aaKnown RBP2.71□□□□□ -1.98
TRM112YNR046W OSH6Q02201 448 aa2.71□□□□□ -1.98
TRM112YNR046W DXO1Q06349 442 aa2.71□□□□□ -1.98
TRM112YNR046W IES4Q08561 116 aa2.71□□□□□ -1.98
TRM112YNR046W RFM1Q12192 310 aa2.71□□□□□ -1.98
TRM112YNR046W ATG5Q12380 294 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms