RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W RAD3P06839 778 aa1.86□□□□□ -2.11
SWM2YNR004W MET16P18408 261 aaPredicted RBP1.86□□□□□ -2.11
SWM2YNR004W TEM1P38987 245 aa1.86□□□□□ -2.11
SWM2YNR004W SUR2P38992 349 aa1.86□□□□□ -2.11
SWM2YNR004W SEN34P39707 275 aa1.86□□□□□ -2.11
SWM2YNR004W YJL144WP47009 104 aa1.86□□□□□ -2.11
SWM2YNR004W MNT4P53745 580 aa1.86□□□□□ -2.11
SWM2YNR004W VBA1Q04301 562 aa1.86□□□□□ -2.11
SWM2YNR004W YPS3Q12303 508 aa1.86□□□□□ -2.11
SWM2YNR004W FLO11P08640 1367 aa1.85□□□□□ -2.11
SWM2YNR004W PET494P07390 489 aaPredicted RBP1.85□□□□□ -2.11
SWM2YNR004W COT1P32798 439 aa1.85□□□□□ -2.11
SWM2YNR004W SMC2P38989 1170 aaKnown RBP1.85□□□□□ -2.11
SWM2YNR004W YAR1P46683 200 aa1.85□□□□□ -2.11
SWM2YNR004W FMP33P46998 180 aa1.85□□□□□ -2.11
SWM2YNR004W YJR141WP47172 347 aaPredicted RBP1.85□□□□□ -2.11
SWM2YNR004W LSB1P53281 241 aa1.85□□□□□ -2.11
SWM2YNR004W MPP6P53725 186 aaPredicted RBP1.85□□□□□ -2.11
SWM2YNR004W MRS2Q01926 470 aa1.85□□□□□ -2.11
SWM2YNR004W ADH6Q04894 360 aaKnown RBP1.85□□□□□ -2.11
SWM2YNR004W DXO1Q06349 442 aa1.85□□□□□ -2.11
SWM2YNR004W YOR114WQ12219 294 aa1.85□□□□□ -2.11
SWM2YNR004W PRR2Q12310 699 aa1.85□□□□□ -2.11
SWM2YNR004W SSK22P25390 1331 aaPredicted RBP1.85□□□□□ -2.11
SWM2YNR004W TDH1P00360 332 aaKnown RBP1.84□□□□□ -2.11
SWM2YNR004W RPS3P05750 240 aaKnown RBP1.84□□□□□ -2.11
SWM2YNR004W PRY2P36110 329 aa1.84□□□□□ -2.11
SWM2YNR004W MRPL37P36532 105 aa1.84□□□□□ -2.11
SWM2YNR004W POP8P38208 133 aa1.84□□□□□ -2.11
SWM2YNR004W FZO1P38297 855 aa1.84□□□□□ -2.11
SWM2YNR004W PRM9P39551 298 aa1.84□□□□□ -2.11
SWM2YNR004W MIG2P53035 382 aa1.84□□□□□ -2.11
SWM2YNR004W MRPL50P53724 139 aa1.84□□□□□ -2.11
SWM2YNR004W SWT21P53873 357 aaPredicted RBP1.84□□□□□ -2.11
SWM2YNR004W OSH6Q02201 448 aa1.84□□□□□ -2.11
SWM2YNR004W SDC1Q03323 175 aa1.84□□□□□ -2.11
SWM2YNR004W KRE28Q04431 385 aa1.84□□□□□ -2.11
SWM2YNR004W KAP95Q06142 861 aaKnown RBP1.84□□□□□ -2.11
SWM2YNR004W TAZ1Q06510 381 aa1.84□□□□□ -2.11
SWM2YNR004W CTR3Q06686 241 aa1.84□□□□□ -2.11
SWM2YNR004W MED4Q12343 284 aa1.84□□□□□ -2.11
SWM2YNR004W CCH1P50077 2039 aa1.83□□□□□ -2.12
SWM2YNR004W CSG2P35206 410 aa1.83□□□□□ -2.12
SWM2YNR004W YKR032WP36127 104 aa1.83□□□□□ -2.12
SWM2YNR004W YIL012WP40551 113 aa1.83□□□□□ -2.12
SWM2YNR004W DSN1P40568 576 aa1.83□□□□□ -2.12
SWM2YNR004W AGX1P43567 385 aa1.83□□□□□ -2.12
SWM2YNR004W YJR012CP47087 207 aa1.83□□□□□ -2.12
SWM2YNR004W OST3P48439 350 aa1.83□□□□□ -2.12
SWM2YNR004W YGL185CP53100 379 aa1.83□□□□□ -2.12
SWM2YNR004W AAH1P53909 347 aa1.83□□□□□ -2.12
SWM2YNR004W DIA1P54005 336 aa1.83□□□□□ -2.12
SWM2YNR004W YML108WQ03759 105 aa1.83□□□□□ -2.12
SWM2YNR004W SPO77Q06134 477 aa1.83□□□□□ -2.12
SWM2YNR004W ATG17Q06410 417 aa1.83□□□□□ -2.12
SWM2YNR004W BTS1Q12051 335 aa1.83□□□□□ -2.12
SWM2YNR004W ATG5Q12380 294 aa1.83□□□□□ -2.12
SWM2YNR004W YAL063C-AQ3E791 96 aa1.83□□□□□ -2.12
SWM2YNR004W COX2P00410 251 aa1.82□□□□□ -2.12
SWM2YNR004W HIS3P06633 220 aa1.82□□□□□ -2.12
SWM2YNR004W MSF1P08425 469 aa1.82□□□□□ -2.12
SWM2YNR004W PRE7P23724 241 aaKnown RBP1.82□□□□□ -2.12
SWM2YNR004W UTR5P32630 166 aa1.82□□□□□ -2.12
SWM2YNR004W AGA2P32781 87 aa1.82□□□□□ -2.12
SWM2YNR004W PPQ1P32945 549 aa1.82□□□□□ -2.12
SWM2YNR004W SFC1P33303 322 aa1.82□□□□□ -2.12
SWM2YNR004W HMT1P38074 348 aa1.82□□□□□ -2.12
SWM2YNR004W SCC4P40090 624 aa1.82□□□□□ -2.12
SWM2YNR004W AVT7P40501 490 aa1.82□□□□□ -2.12
SWM2YNR004W ALG9P53868 555 aaKnown RBP1.82□□□□□ -2.12
SWM2YNR004W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SWM2YNR004W CSM4Q08955 156 aa1.82□□□□□ -2.12
SWM2YNR004W TY3A-GQ12173 290 aa1.82□□□□□ -2.12
SWM2YNR004W TY3A-IQ99219 290 aa1.82□□□□□ -2.12
SWM2YNR004W AI5_BETAQ9ZZX0 354 aa1.82□□□□□ -2.12
SWM2YNR004W MET2P08465 486 aa1.81□□□□□ -2.12
SWM2YNR004W POX1P13711 748 aa1.81□□□□□ -2.12
SWM2YNR004W RNA15P25299 296 aaPredicted RBP1.81□□□□□ -2.12
SWM2YNR004W CWP1P28319 239 aa1.81□□□□□ -2.12
SWM2YNR004W RIB7P33312 244 aa1.81□□□□□ -2.12
SWM2YNR004W YUH1P35127 236 aa1.81□□□□□ -2.12
SWM2YNR004W MRX3P38172 270 aa1.81□□□□□ -2.12
SWM2YNR004W PRS2P38620 318 aaKnown RBP1.81□□□□□ -2.12
SWM2YNR004W NBP35P52920 328 aa1.81□□□□□ -2.12
SWM2YNR004W PEX31P53203 462 aa1.81□□□□□ -2.12
SWM2YNR004W GTO3Q04806 366 aa1.81□□□□□ -2.12
SWM2YNR004W PST1Q12355 444 aa1.81□□□□□ -2.12
SWM2YNR004W SNU23Q12368 194 aaPredicted RBP1.81□□□□□ -2.12
SWM2YNR004W RRP36Q12481 300 aaPredicted RBP1.81□□□□□ -2.12
SWM2YNR004W NUP157P40064 1391 aaKnown RBP1.81□□□□□ -2.12
SWM2YNR004W TDH2P00358 332 aaKnown RBP1.8□□□□□ -2.12
SWM2YNR004W RPS23AP0CX29 145 aaKnown RBP1.8□□□□□ -2.12
SWM2YNR004W RPS23BP0CX30 145 aa1.8□□□□□ -2.12
SWM2YNR004W RSR1P13856 272 aa1.8□□□□□ -2.12
SWM2YNR004W MIG1P27705 504 aa1.8□□□□□ -2.12
SWM2YNR004W RNP1P32385 249 aa1.8□□□□□ -2.12
SWM2YNR004W COY1P34237 679 aa1.8□□□□□ -2.12
SWM2YNR004W PRS4P38063 326 aaPredicted RBP1.8□□□□□ -2.12
SWM2YNR004W SSH1P38353 490 aaKnown RBP1.8□□□□□ -2.12
SWM2YNR004W YHR045WP38775 560 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms