RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	ERG27	Q12452	347 aa	Known RBP	4.09	□□□□□ -1.76
ATM1	YMR301C	BPH1	P25356	2167 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	EXG1	P23776	448 aa	Known RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	MRP20	P32387	263 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	ECM4	P36156	370 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	ISC1	P40015	477 aa	Known RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	YER084W	P40057	128 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	URM1	P40554	99 aa	Predicted RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	NOP9	P47077	666 aa	Known RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	BAT2	P47176	376 aa	Known RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	SIP18	P50263	79 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	RPL6A	Q02326	176 aa	Known RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	DML1	Q03652	475 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	ACL4	Q03771	387 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	HMO1	Q03973	246 aa	Known RBP	4.08	□□□□□ -1.76
ATM1	YMR301C	GEP5	Q12393	293 aa		4.08	□□□□□ -1.76
ATM1	YMR301C	RPL35A	P0CX84	120 aa	Known RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	RPL35B	P0CX85	120 aa	Known RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	PWP1	P21304	576 aa	Known RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	ASF2	P32448	525 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	MSN4	P33749	630 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	YKL071W	P36086	256 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	CDS1	P38221	457 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	GDS1	P41913	522 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	SKO1	Q02100	647 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	NUP116	Q02630	1113 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	SPC2	Q04969	178 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	CTS2	Q06350	511 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	YLR358C	O13565	187 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	RPS16A	P0CX51	143 aa	Known RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	RPS16B	P0CX52	143 aa	Known RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	PPA2	P28239	310 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	GDT1	P38301	280 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	CIN4	P39110	191 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	RBG1	P39729	369 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	DPB11	P47027	764 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	MRK1	P50873	501 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	MNT4	P53745	580 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	YNL095C	P53932	642 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	CRZ1	P53968	678 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	RRP17	Q04031	235 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	SNT309	Q06091	175 aa	Predicted RBP	4.07	□□□□□ -1.76
ATM1	YMR301C	SPC3	Q12133	184 aa		4.07	□□□□□ -1.76
ATM1	YMR301C	CYC1	P00044	109 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM1	YMR301C	CAM1	P29547	415 aa	Known RBP	4.06	□□□□□ -1.76
ATM1	YMR301C	COQ2	P32378	372 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
ATM1	YMR301C	HCS1	P34243	683 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	YUH1	P35127	236 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	PDX3	P38075	228 aa	Known RBP	4.06	□□□□□ -1.76
ATM1	YMR301C	PEX32	P38292	413 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	PIG2	P40187	538 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	SNX4	P47057	423 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	CGR1	P53188	120 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	SED1	Q01589	338 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	NRG1	Q03125	231 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	YTH1	Q06102	208 aa	Predicted RBP	4.06	□□□□□ -1.76
ATM1	YMR301C	AIM6	Q07716	390 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	FRE6	Q12473	712 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	TFC1	P32367	649 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
ATM1	YMR301C	YBR063C	P38083	404 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	RTC2	P38279	296 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	ECM14	P38836	430 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	YIL029C	P40538	142 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	POP1	P41812	875 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	IDS2	P46958	469 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	YGR168C	P53293	376 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	MTM1	P53320	366 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	ASI1	P54074	624 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	YMR102C	Q03177	834 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	RVB1	Q03940	463 aa	Known RBP	4.06	□□□□□ -1.76
ATM1	YMR301C	SPC24	Q04477	213 aa		4.06	□□□□□ -1.76
ATM1	YMR301C	SPO7	P18410	259 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	VPH2	P32341	215 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	MSS4	P38994	779 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	EOS1	P53938	366 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	FIT3	Q08907	204 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	SRL2	Q12020	392 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	YLR126C	Q12288	251 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	SPO24	Q3E752	67 aa		4.05	□□□□□ -1.76
ATM1	YMR301C	ERG4	P25340	473 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	YBR241C	P38142	488 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	HMS2	P47175	358 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	GTF1	P53260	183 aa	Predicted RBP	4.04	□□□□□ -1.76
ATM1	YMR301C	YPL077C	Q02831	240 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	IPK1	Q06667	281 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	GAT3	Q07928	141 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	MIM1	Q08176	113 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	URE2	P23202	354 aa	Known RBP	4.04	□□□□□ -1.76
ATM1	YMR301C	CPR2	P23285	205 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	CLB2	P24869	491 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	DOA4	P32571	926 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
ATM1	YMR301C	CLB6	P32943	380 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	SPT10	P35208	640 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	FZO1	P38297	855 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	YDL183C	P48569	320 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	UBC13	P52490	153 aa		4.04	□□□□□ -1.76
ATM1	YMR301C	COS1	P53822	381 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms