RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	YLR446W	Q06204	433 aa		2.73	□□□□□ -1.97
PML39	YML107C	YPR063C	Q12160	140 aa		2.73	□□□□□ -1.97
PML39	YML107C	YPR096C	O13587	100 aa		2.72	□□□□□ -1.97
PML39	YML107C	RPL31A	P0C2H8	113 aa	Known RBP	2.72	□□□□□ -1.97
PML39	YML107C	RPC25	P35718	212 aa		2.72	□□□□□ -1.97
PML39	YML107C	GPX1	P36014	167 aa		2.72	□□□□□ -1.97
PML39	YML107C	KEL2	P50090	882 aa		2.72	□□□□□ -1.97
PML39	YML107C	IES3	Q12345	250 aa		2.72	□□□□□ -1.97
PML39	YML107C	YPR064W	Q12492	139 aa		2.72	□□□□□ -1.97
PML39	YML107C	SNQ2	P32568	1501 aa	Known RBP	2.72	□□□□□ -1.97
PML39	YML107C	STH1	P32597	1359 aa		2.72	□□□□□ -1.97
PML39	YML107C	RPS23A	P0CX29	145 aa	Known RBP	2.71	□□□□□ -1.98
PML39	YML107C	RPS23B	P0CX30	145 aa		2.71	□□□□□ -1.98
PML39	YML107C	IMP1	P28627	190 aa		2.71	□□□□□ -1.98
PML39	YML107C	YKL063C	P35725	167 aa		2.71	□□□□□ -1.98
PML39	YML107C	TPO5	P36029	618 aa		2.71	□□□□□ -1.98
PML39	YML107C	HSM3	P38348	480 aa		2.71	□□□□□ -1.98
PML39	YML107C	YIL012W	P40551	113 aa		2.71	□□□□□ -1.98
PML39	YML107C	CDC40	P40968	455 aa	Predicted RBP	2.71	□□□□□ -1.98
PML39	YML107C	AGX1	P43567	385 aa		2.71	□□□□□ -1.98
PML39	YML107C	BUD13	P46947	266 aa	Predicted RBP	2.71	□□□□□ -1.98
PML39	YML107C	UBC13	P52490	153 aa		2.71	□□□□□ -1.98
PML39	YML107C	YPR172W	Q06608	200 aa		2.71	□□□□□ -1.98
PML39	YML107C	YPL264C	Q08980	353 aa		2.71	□□□□□ -1.98
PML39	YML107C	VPS1	P21576	704 aa	Known RBP	2.7	□□□□□ -1.98
PML39	YML107C	VPH2	P32341	215 aa		2.7	□□□□□ -1.98
PML39	YML107C	IMP3	P32899	183 aa	Predicted RBP	2.7	□□□□□ -1.98
PML39	YML107C	RPT5	P33297	434 aa	Known RBP	2.7	□□□□□ -1.98
PML39	YML107C	ECM14	P38836	430 aa		2.7	□□□□□ -1.98
PML39	YML107C	YIA6	P40556	373 aa		2.7	□□□□□ -1.98
PML39	YML107C	ECO1	P43605	281 aa		2.7	□□□□□ -1.98
PML39	YML107C	PRP24	P49960	444 aa	Known RBP	2.7	□□□□□ -1.98
PML39	YML107C	BIO4	P53630	237 aa		2.7	□□□□□ -1.98
PML39	YML107C	ARP5	P53946	755 aa		2.7	□□□□□ -1.98
PML39	YML107C	YNL040W	P53960	456 aa	Predicted RBP	2.7	□□□□□ -1.98
PML39	YML107C	ACT1	P60010	375 aa	Known RBP	2.7	□□□□□ -1.98
PML39	YML107C	ARV1	Q06541	321 aa		2.7	□□□□□ -1.98
PML39	YML107C	ASR1	Q06834	288 aa		2.7	□□□□□ -1.98
PML39	YML107C	RSF2	P46974	1380 aa		2.7	□□□□□ -1.98
PML39	YML107C	CSM1	P25651	190 aa		2.69	□□□□□ -1.98
PML39	YML107C	ARO4	P32449	370 aa	Known RBP	2.69	□□□□□ -1.98
PML39	YML107C	MRPL3	P36516	390 aa		2.69	□□□□□ -1.98
PML39	YML107C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
PML39	YML107C	KRE29	P40026	464 aa		2.69	□□□□□ -1.98
PML39	YML107C	YFL064C	P43540	174 aa		2.69	□□□□□ -1.98
PML39	YML107C	RPN14	P53196	417 aa		2.69	□□□□□ -1.98
PML39	YML107C	YPL077C	Q02831	240 aa		2.69	□□□□□ -1.98
PML39	YML107C	YDR222W	Q04925	415 aa		2.69	□□□□□ -1.98
PML39	YML107C	CAT8	P39113	1433 aa		2.68	□□□□□ -1.98
PML39	YML107C	SEC7	P11075	2009 aa	Known RBP	2.68	□□□□□ -1.98
PML39	YML107C	GPI12	P23797	304 aa		2.68	□□□□□ -1.98
PML39	YML107C	GCG1	P32656	232 aa	Known RBP	2.68	□□□□□ -1.98
PML39	YML107C	YBR062C	P38239	180 aa		2.68	□□□□□ -1.98
PML39	YML107C	MED8	P38304	223 aa		2.68	□□□□□ -1.98
PML39	YML107C	GDS1	P41913	522 aa		2.68	□□□□□ -1.98
PML39	YML107C	LIF1	P53150	421 aa		2.68	□□□□□ -1.98
PML39	YML107C	RRN5	Q02983	363 aa		2.68	□□□□□ -1.98
PML39	YML107C	YDR114C	Q04597	100 aa		2.68	□□□□□ -1.98
PML39	YML107C	ECM18	Q04623	453 aa		2.68	□□□□□ -1.98
PML39	YML107C	GTO3	Q04806	366 aa		2.68	□□□□□ -1.98
PML39	YML107C	PEX30	Q06169	523 aa		2.68	□□□□□ -1.98
PML39	YML107C	SMD2	Q06217	110 aa	Known RBP	2.68	□□□□□ -1.98
PML39	YML107C	RRT8	Q08219	342 aa		2.68	□□□□□ -1.98
PML39	YML107C	POM33	Q12164	279 aa		2.68	□□□□□ -1.98
PML39	YML107C	UGA1	P17649	471 aa		2.67	□□□□□ -1.98
PML39	YML107C	COY1	P34237	679 aa		2.67	□□□□□ -1.98
PML39	YML107C	RPC37	P36121	282 aa		2.67	□□□□□ -1.98
PML39	YML107C	VAB2	P40003	282 aa		2.67	□□□□□ -1.98
PML39	YML107C	SPO73	P40031	143 aa		2.67	□□□□□ -1.98
PML39	YML107C	PNC1	P53184	216 aa	Known RBP	2.67	□□□□□ -1.98
PML39	YML107C	LSB1	P53281	241 aa		2.67	□□□□□ -1.98
PML39	YML107C	DIA1	P54005	336 aa		2.67	□□□□□ -1.98
PML39	YML107C	SPO19	Q03029	223 aa		2.67	□□□□□ -1.98
PML39	YML107C	YMR209C	Q03648	457 aa		2.67	□□□□□ -1.98
PML39	YML107C	DXO1	Q06349	442 aa		2.67	□□□□□ -1.98
PML39	YML107C	GPN3	Q06543	272 aa		2.67	□□□□□ -1.98
PML39	YML107C	YIL002W-A	Q3E7Z5	69 aa		2.67	□□□□□ -1.98
PML39	YML107C	ILV1	P00927	576 aa	Known RBP	2.66	□□□□□ -1.98
PML39	YML107C	YAK1	P14680	807 aa		2.66	□□□□□ -1.98
PML39	YML107C	CDC42	P19073	191 aa		2.66	□□□□□ -1.98
PML39	YML107C	MRPL25	P23369	157 aa		2.66	□□□□□ -1.98
PML39	YML107C	TKL2	P33315	681 aa		2.66	□□□□□ -1.98
PML39	YML107C	MRPL40	P36534	297 aa		2.66	□□□□□ -1.98
PML39	YML107C	HIS2	P38635	335 aa		2.66	□□□□□ -1.98
PML39	YML107C	YFR045W	P43617	309 aa		2.66	□□□□□ -1.98
PML39	YML107C	YJL144W	P47009	104 aa		2.66	□□□□□ -1.98
PML39	YML107C	GTO1	P48239	356 aa		2.66	□□□□□ -1.98
PML39	YML107C	NUP84	P52891	726 aa		2.66	□□□□□ -1.98
PML39	YML107C	UFD1	P53044	361 aa		2.66	□□□□□ -1.98
PML39	YML107C	COG7	P53195	279 aa		2.66	□□□□□ -1.98
PML39	YML107C	TAZ1	Q06510	381 aa		2.66	□□□□□ -1.98
PML39	YML107C	BER1	Q06688	274 aa	Known RBP	2.66	□□□□□ -1.98
PML39	YML107C	URB1	P34241	1764 aa	Known RBP	2.65	□□□□□ -1.99
PML39	YML107C	TFS1	P14306	219 aa		2.65	□□□□□ -1.99
PML39	YML107C	DAL81	P21657	970 aa		2.65	□□□□□ -1.99
PML39	YML107C	ICL1	P28240	557 aa	Predicted RBP	2.65	□□□□□ -1.99
PML39	YML107C	RME1	P32338	300 aa	Known RBP	2.65	□□□□□ -1.99
PML39	YML107C	AGP3	P43548	558 aa		2.65	□□□□□ -1.99
PML39	YML107C	LOC1	P43586	204 aa	Predicted RBP	2.65	□□□□□ -1.99
PML39	YML107C	YPT32	P51996	222 aa	Known RBP	2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms