RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C ATG17Q06410 417 aa3.62□□□□□ -1.83
VPS71YML041C AI5_BETAQ9ZZX0 354 aa3.62□□□□□ -1.83
VPS71YML041C YMR316C-AI2HB70 103 aa3.61□□□□□ -1.83
VPS71YML041C RPP0P05317 312 aaKnown RBP3.61□□□□□ -1.83
VPS71YML041C ASP3-2P0CX77 362 aa3.61□□□□□ -1.83
VPS71YML041C ASP3-3P0CX78 362 aa3.61□□□□□ -1.83
VPS71YML041C ASP3-4P0CX79 362 aa3.61□□□□□ -1.83
VPS71YML041C ASP3-1P0CZ17 362 aa3.61□□□□□ -1.83
VPS71YML041C VPH2P32341 215 aa3.61□□□□□ -1.83
VPS71YML041C PRP18P33411 251 aaPredicted RBP3.61□□□□□ -1.83
VPS71YML041C RIB1P38066 345 aa3.61□□□□□ -1.83
VPS71YML041C MIC12P38341 106 aa3.61□□□□□ -1.83
VPS71YML041C YER184CP39961 794 aa3.61□□□□□ -1.83
VPS71YML041C SMB1P40018 196 aaKnown RBP3.61□□□□□ -1.83
VPS71YML041C KRE29P40026 464 aa3.61□□□□□ -1.83
VPS71YML041C HAM1P47119 197 aaKnown RBP3.61□□□□□ -1.83
VPS71YML041C RAD17P48581 401 aa3.61□□□□□ -1.83
VPS71YML041C NBP1P52919 319 aaPredicted RBP3.61□□□□□ -1.83
VPS71YML041C LIF1P53150 421 aa3.61□□□□□ -1.83
VPS71YML041C CUS2P53830 285 aaPredicted RBP3.61□□□□□ -1.83
VPS71YML041C YNL095CP53932 642 aa3.61□□□□□ -1.83
VPS71YML041C SEC13Q04491 297 aaKnown RBP3.61□□□□□ -1.83
VPS71YML041C YOR292CQ08743 309 aa3.61□□□□□ -1.83
VPS71YML041C MMT2Q08970 484 aa3.61□□□□□ -1.83
VPS71YML041C YDR018CQ12185 396 aa3.61□□□□□ -1.83
VPS71YML041C CDC33P07260 213 aaKnown RBP3.6□□□□□ -1.83
VPS71YML041C TCP1P12612 559 aaKnown RBP3.6□□□□□ -1.83
VPS71YML041C YPK2P18961 677 aa3.6□□□□□ -1.83
VPS71YML041C CAM1P29547 415 aaKnown RBP3.6□□□□□ -1.83
VPS71YML041C ASF2P32448 525 aaPredicted RBP3.6□□□□□ -1.83
VPS71YML041C TIP20P33891 701 aa3.6□□□□□ -1.83
VPS71YML041C JEN1P36035 616 aa3.6□□□□□ -1.83
VPS71YML041C YBR062CP38239 180 aa3.6□□□□□ -1.83
VPS71YML041C PRE5P40302 234 aaKnown RBP3.6□□□□□ -1.83
VPS71YML041C YFL064CP43540 174 aa3.6□□□□□ -1.83
VPS71YML041C YJR079WP47126 109 aa3.6□□□□□ -1.83
VPS71YML041C SDT1P53078 280 aa3.6□□□□□ -1.83
VPS71YML041C ZRG17P53735 605 aa3.6□□□□□ -1.83
VPS71YML041C YDR115WQ04598 105 aa3.6□□□□□ -1.83
VPS71YML041C LIP2Q06005 328 aa3.6□□□□□ -1.83
VPS71YML041C RRS1Q08746 203 aaKnown RBP3.6□□□□□ -1.83
VPS71YML041C YPL119C-AQ3E751 87 aa3.6□□□□□ -1.83
VPS71YML041C RPL4AP10664 362 aaKnown RBP3.59□□□□□ -1.83
VPS71YML041C POX1P13711 748 aa3.59□□□□□ -1.83
VPS71YML041C YMR31P19955 123 aa3.59□□□□□ -1.83
VPS71YML041C GPX1P36014 167 aa3.59□□□□□ -1.83
VPS71YML041C MRPL3P36516 390 aa3.59□□□□□ -1.83
VPS71YML041C MRPL27P36526 146 aaPredicted RBP3.59□□□□□ -1.83
VPS71YML041C MBA1P38300 278 aa3.59□□□□□ -1.83
VPS71YML041C ATG12P38316 186 aa3.59□□□□□ -1.83
VPS71YML041C GGC1P38988 300 aa3.59□□□□□ -1.83
VPS71YML041C MIC19P43594 170 aa3.59□□□□□ -1.83
VPS71YML041C RPL4BP49626 362 aaKnown RBP3.59□□□□□ -1.83
VPS71YML041C SWS2P53937 143 aa3.59□□□□□ -1.83
VPS71YML041C MRX11Q03079 207 aa3.59□□□□□ -1.83
VPS71YML041C SCW10Q04951 389 aa3.59□□□□□ -1.83
VPS71YML041C YPR098CQ06089 161 aa3.59□□□□□ -1.83
VPS71YML041C TPI1P00942 248 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C COX4P04037 155 aa3.58□□□□□ -1.84
VPS71YML041C RPL27AP0C2H6 136 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C RPL27BP0C2H7 136 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C SMP1P38128 452 aa3.58□□□□□ -1.84
VPS71YML041C GPI18P38211 433 aa3.58□□□□□ -1.84
VPS71YML041C MED8P38304 223 aa3.58□□□□□ -1.84
VPS71YML041C RTC3P38804 111 aaPredicted RBP3.58□□□□□ -1.84
VPS71YML041C ERG28P40030 148 aa3.58□□□□□ -1.84
VPS71YML041C MIC26P50087 233 aa3.58□□□□□ -1.84
VPS71YML041C NBP35P52920 328 aa3.58□□□□□ -1.84
VPS71YML041C YGL039WP53183 348 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C RPL21AQ02753 160 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C PAL1Q05518 499 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C ARC18Q05933 178 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C SRO7Q12038 1033 aa3.58□□□□□ -1.84
VPS71YML041C YRA1Q12159 226 aaKnown RBP3.58□□□□□ -1.84
VPS71YML041C RFM1Q12192 310 aa3.58□□□□□ -1.84
VPS71YML041C TRM10Q12400 293 aa3.58□□□□□ -1.84
VPS71YML041C YKL183C-AQ3E765 70 aa3.58□□□□□ -1.84
VPS71YML041C YOL085CQ99345 113 aa3.58□□□□□ -1.84
VPS71YML041C KSS1P14681 368 aa3.57□□□□□ -1.84
VPS71YML041C OSM1P21375 501 aaKnown RBP3.57□□□□□ -1.84
VPS71YML041C YCR102CP25608 368 aa3.57□□□□□ -1.84
VPS71YML041C CBT1P36038 271 aaPredicted RBP3.57□□□□□ -1.84
VPS71YML041C URA8P38627 578 aaPredicted RBP3.57□□□□□ -1.84
VPS71YML041C YHI9P38765 294 aa3.57□□□□□ -1.84
VPS71YML041C SEN34P39707 275 aa3.57□□□□□ -1.84
VPS71YML041C FRT2P39734 528 aa3.57□□□□□ -1.84
VPS71YML041C RRG9P40156 214 aa3.57□□□□□ -1.84
VPS71YML041C SER33P40510 469 aa3.57□□□□□ -1.84
VPS71YML041C JHD2P47156 728 aaPredicted RBP3.57□□□□□ -1.84
VPS71YML041C SLX9P53251 210 aaPredicted RBP3.57□□□□□ -1.84
VPS71YML041C RHO3Q00245 231 aaKnown RBP3.57□□□□□ -1.84
VPS71YML041C SNZ1Q03148 297 aa3.57□□□□□ -1.84
VPS71YML041C PEX10Q05568 337 aa3.57□□□□□ -1.84
VPS71YML041C LOA1Q06508 300 aa3.57□□□□□ -1.84
VPS71YML041C TMC1Q08422 150 aaPredicted RBP3.57□□□□□ -1.84
VPS71YML041C YPL278CQ08990 100 aa3.57□□□□□ -1.84
VPS71YML041C EPT1P22140 391 aa3.56□□□□□ -1.84
VPS71YML041C IMP1P28627 190 aa3.56□□□□□ -1.84
VPS71YML041C IDH1P28834 360 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
VPS71YML041C SPS19P32573 292 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 100.2 ms