RNA–Protein interactions for RNA: YJR028W

YJR028W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YJR028W, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YJR028WYJR028W YPL278CQ08990 100 aa3.52□□□□□ -1.85
YJR028WYJR028W AI5_BETAQ9ZZX0 354 aa3.52□□□□□ -1.85
YJR028WYJR028W CDC42P19073 191 aa3.51□□□□□ -1.85
YJR028WYJR028W SEO1P39709 593 aa3.51□□□□□ -1.85
YJR028WYJR028W RTR1P40084 226 aaPredicted RBP3.51□□□□□ -1.85
YJR028WYJR028W UFE1P41834 346 aa3.51□□□□□ -1.85
YJR028WYJR028W MYO5Q04439 1219 aaKnown RBP3.51□□□□□ -1.85
YJR028WYJR028W STH1P32597 1359 aa3.51□□□□□ -1.85
YJR028WYJR028W MATALPHA1P0CY06 175 aa3.5□□□□□ -1.85
YJR028WYJR028W HMLALPHA1P0CY07 175 aa3.5□□□□□ -1.85
YJR028WYJR028W MRP21P38175 177 aa3.5□□□□□ -1.85
YJR028WYJR028W LDB7P38210 180 aa3.5□□□□□ -1.85
YJR028WYJR028W SEN34P39707 275 aa3.5□□□□□ -1.85
YJR028WYJR028W KRE29P40026 464 aa3.5□□□□□ -1.85
YJR028WYJR028W OTU1P43558 301 aa3.5□□□□□ -1.85
YJR028WYJR028W HOC1P47124 396 aa3.5□□□□□ -1.85
YJR028WYJR028W FMP41P53889 259 aaKnown RBP3.5□□□□□ -1.85
YJR028WYJR028W EBS1Q03466 884 aaKnown RBP3.5□□□□□ -1.85
YJR028WYJR028W KRE28Q04431 385 aa3.5□□□□□ -1.85
YJR028WYJR028W RNA15P25299 296 aaPredicted RBP3.49□□□□□ -1.85
YJR028WYJR028W HOM6P31116 359 aaKnown RBP3.49□□□□□ -1.85
YJR028WYJR028W TPS2P31688 896 aaKnown RBP3.49□□□□□ -1.85
YJR028WYJR028W KRE6P32486 720 aa3.49□□□□□ -1.85
YJR028WYJR028W ASP1P38986 381 aaPredicted RBP3.49□□□□□ -1.85
YJR028WYJR028W MSS2P40990 351 aa3.49□□□□□ -1.85
YJR028WYJR028W PRP24P49960 444 aaKnown RBP3.49□□□□□ -1.85
YJR028WYJR028W YGL118CP53132 145 aa3.49□□□□□ -1.85
YJR028WYJR028W CWC21Q03375 135 aaKnown RBP3.49□□□□□ -1.85
YJR028WYJR028W MCH1Q07376 486 aa3.49□□□□□ -1.85
YJR028WYJR028W YDL144CQ07589 356 aa3.49□□□□□ -1.85
YJR028WYJR028W SNF8Q12483 233 aa3.49□□□□□ -1.85
YJR028WYJR028W ARG80P07249 177 aa3.48□□□□□ -1.85
YJR028WYJR028W IMP1P28627 190 aa3.48□□□□□ -1.85
YJR028WYJR028W YBR096WP38256 230 aa3.48□□□□□ -1.85
YJR028WYJR028W EDC2P40023 145 aaPredicted RBP3.48□□□□□ -1.85
YJR028WYJR028W YIL012WP40551 113 aa3.48□□□□□ -1.85
YJR028WYJR028W HSH155P49955 971 aaKnown RBP3.48□□□□□ -1.85
YJR028WYJR028W COG7P53195 279 aa3.48□□□□□ -1.85
YJR028WYJR028W YGR067CP53243 804 aa3.48□□□□□ -1.85
YJR028WYJR028W MRPL50P53724 139 aa3.48□□□□□ -1.85
YJR028WYJR028W GIS2P53849 153 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
YJR028WYJR028W NOP13P53883 403 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
YJR028WYJR028W MRS2Q01926 470 aa3.48□□□□□ -1.85
YJR028WYJR028W AUS1Q08409 1394 aa3.48□□□□□ -1.85
YJR028WYJR028W COS2P0CX12 379 aa3.47□□□□□ -1.85
YJR028WYJR028W COS3P0CX13 379 aa3.47□□□□□ -1.85
YJR028WYJR028W RPL4AP10664 362 aaKnown RBP3.47□□□□□ -1.85
YJR028WYJR028W TCP1P12612 559 aaKnown RBP3.47□□□□□ -1.85
YJR028WYJR028W NTG1P31378 399 aa3.47□□□□□ -1.85
YJR028WYJR028W BMH2P34730 273 aaKnown RBP3.47□□□□□ -1.85
YJR028WYJR028W POP8P38208 133 aa3.47□□□□□ -1.85
YJR028WYJR028W MED8P38304 223 aa3.47□□□□□ -1.85
YJR028WYJR028W YHL049CP38722 271 aa3.47□□□□□ -1.85
YJR028WYJR028W COS4P43542 379 aa3.47□□□□□ -1.85
YJR028WYJR028W JHD2P47156 728 aaPredicted RBP3.47□□□□□ -1.85
YJR028WYJR028W RPL4BP49626 362 aaKnown RBP3.47□□□□□ -1.85
YJR028WYJR028W UFD1P53044 361 aa3.47□□□□□ -1.85
YJR028WYJR028W CTF19Q02732 369 aa3.47□□□□□ -1.85
YJR028WYJR028W ARC18Q05933 178 aaKnown RBP3.47□□□□□ -1.85
YJR028WYJR028W PHO80P20052 293 aa3.46□□□□□ -1.85
YJR028WYJR028W VPS3P23643 1011 aa3.46□□□□□ -1.85
YJR028WYJR028W SRB4P32569 687 aa3.46□□□□□ -1.85
YJR028WYJR028W YHL044WP38727 235 aa3.46□□□□□ -1.85
YJR028WYJR028W FRT2P39734 528 aa3.46□□□□□ -1.85
YJR028WYJR028W YIL054WP40524 105 aa3.46□□□□□ -1.85
YJR028WYJR028W SYS1P41544 203 aa3.46□□□□□ -1.85
YJR028WYJR028W COQ5P49017 307 aa3.46□□□□□ -1.85
YJR028WYJR028W YNL095CP53932 642 aa3.46□□□□□ -1.85
YJR028WYJR028W YMR166CQ03829 368 aa3.46□□□□□ -1.85
YJR028WYJR028W SGT2Q12118 346 aaKnown RBP3.46□□□□□ -1.85
YJR028WYJR028W FLO11P08640 1367 aa3.46□□□□□ -1.86
YJR028WYJR028W YMR316C-AI2HB70 103 aa3.45□□□□□ -1.86
YJR028WYJR028W RPS19AP07280 144 aaKnown RBP3.45□□□□□ -1.86
YJR028WYJR028W RPS19BP07281 144 aaPredicted RBP3.45□□□□□ -1.86
YJR028WYJR028W FUS3P16892 353 aaKnown RBP3.45□□□□□ -1.86
YJR028WYJR028W CAM1P29547 415 aaKnown RBP3.45□□□□□ -1.86
YJR028WYJR028W DOA4P32571 926 aa3.45□□□□□ -1.86
YJR028WYJR028W CAT2P32796 670 aaKnown RBP3.45□□□□□ -1.86
YJR028WYJR028W JEN1P36035 616 aa3.45□□□□□ -1.86
YJR028WYJR028W HMT1P38074 348 aa3.45□□□□□ -1.86
YJR028WYJR028W MRPS9P38120 278 aa3.45□□□□□ -1.86
YJR028WYJR028W BDH1P39714 382 aa3.45□□□□□ -1.86
YJR028WYJR028W AVT6P40074 448 aa3.45□□□□□ -1.86
YJR028WYJR028W RPC17P47076 161 aa3.45□□□□□ -1.86
YJR028WYJR028W CAX4P53223 239 aa3.45□□□□□ -1.86
YJR028WYJR028W YDR209CQ03480 137 aa3.45□□□□□ -1.86
YJR028WYJR028W SPO77Q06134 477 aa3.45□□□□□ -1.86
YJR028WYJR028W COQ10Q08058 207 aa3.45□□□□□ -1.86
YJR028WYJR028W RFM1Q12192 310 aa3.45□□□□□ -1.86
YJR028WYJR028W YPL119C-AQ3E751 87 aa3.45□□□□□ -1.86
YJR028WYJR028W OSM1P21375 501 aaKnown RBP3.44□□□□□ -1.86
YJR028WYJR028W YKT6P36015 200 aaKnown RBP3.44□□□□□ -1.86
YJR028WYJR028W YJR079WP47126 109 aa3.44□□□□□ -1.86
YJR028WYJR028W SMD1Q02260 146 aaPredicted RBP3.44□□□□□ -1.86
YJR028WYJR028W YCT1Q12235 531 aa3.44□□□□□ -1.86
YJR028WYJR028W ATG5Q12380 294 aa3.44□□□□□ -1.86
YJR028WYJR028W RPB4P20433 221 aaPredicted RBP3.44□□□□□ -1.86
YJR028WYJR028W PRE7P23724 241 aaKnown RBP3.44□□□□□ -1.86
YJR028WYJR028W YKL075CP36083 450 aa3.44□□□□□ -1.86
YJR028WYJR028W HEK2P38199 381 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms