RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W TY1A-BLQ12266 440 aa5.42□□□□□ -1.54
SKN1YGR143W ATG5Q12380 294 aa5.42□□□□□ -1.54
SKN1YGR143W TRM10Q12400 293 aa5.42□□□□□ -1.54
SKN1YGR143W ACO1P19414 778 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
SKN1YGR143W PBN1P25580 416 aa5.42□□□□□ -1.54
SKN1YGR143W MUD1P32605 298 aaKnown RBP5.42□□□□□ -1.54
SKN1YGR143W ERG28P40030 148 aa5.42□□□□□ -1.54
SKN1YGR143W POG1P40473 351 aa5.42□□□□□ -1.54
SKN1YGR143W YFL052WP43551 465 aa5.42□□□□□ -1.54
SKN1YGR143W PTR3P43606 678 aa5.42□□□□□ -1.54
SKN1YGR143W RPL22BP56628 122 aaKnown RBP5.42□□□□□ -1.54
SKN1YGR143W TY1A-MR1Q04215 440 aa5.42□□□□□ -1.54
SKN1YGR143W ECM22Q05958 814 aaPredicted RBP5.42□□□□□ -1.54
SKN1YGR143W PAM18Q07914 168 aa5.42□□□□□ -1.54
SKN1YGR143W YTM1Q12024 460 aaPredicted RBP5.42□□□□□ -1.54
SKN1YGR143W TRM13Q12383 476 aa5.42□□□□□ -1.54
SKN1YGR143W YLR099W-AQ3E798 87 aa5.42□□□□□ -1.54
SKN1YGR143W YKL033W-AQ86ZR7 236 aa5.42□□□□□ -1.54
SKN1YGR143W HBN1Q96VH4 193 aa5.42□□□□□ -1.54
SKN1YGR143W SGA1P08019 549 aa5.41□□□□□ -1.54
SKN1YGR143W MET22P32179 357 aa5.41□□□□□ -1.54
SKN1YGR143W YKR051WP36142 418 aa5.41□□□□□ -1.54
SKN1YGR143W HEM14P40012 539 aa5.41□□□□□ -1.54
SKN1YGR143W GET2P40056 285 aa5.41□□□□□ -1.54
SKN1YGR143W ROG1P53118 685 aa5.41□□□□□ -1.54
SKN1YGR143W ADI1Q03677 179 aa5.41□□□□□ -1.54
SKN1YGR143W DAL4Q04895 635 aa5.41□□□□□ -1.54
SKN1YGR143W CNL1Q06333 122 aa5.41□□□□□ -1.54
SKN1YGR143W BSP1Q06604 576 aa5.41□□□□□ -1.54
SKN1YGR143W ASR1Q06834 288 aa5.41□□□□□ -1.54
SKN1YGR143W FOL3Q12676 427 aaPredicted RBP5.41□□□□□ -1.54
SKN1YGR143W CYC7P00045 113 aa5.41□□□□□ -1.54
SKN1YGR143W PDA1P16387 420 aaKnown RBP5.41□□□□□ -1.54
SKN1YGR143W SEC22P22214 214 aa5.41□□□□□ -1.54
SKN1YGR143W YKL070WP36087 169 aa5.41□□□□□ -1.54
SKN1YGR143W QDR3P38227 689 aa5.41□□□□□ -1.54
SKN1YGR143W MUP3P38734 546 aa5.41□□□□□ -1.54
SKN1YGR143W END3P39013 349 aa5.41□□□□□ -1.54
SKN1YGR143W LAA1P39526 2014 aa5.41□□□□□ -1.54
SKN1YGR143W YAL037WP39728 267 aa5.41□□□□□ -1.54
SKN1YGR143W HPA3P39979 161 aa5.41□□□□□ -1.54
SKN1YGR143W YIL060WP40519 144 aa5.41□□□□□ -1.54
SKN1YGR143W CDC40P40968 455 aaPredicted RBP5.41□□□□□ -1.54
SKN1YGR143W BAP3P41815 604 aa5.41□□□□□ -1.54
SKN1YGR143W SCD6P45978 349 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SKN1YGR143W YGL235WP53071 178 aa5.41□□□□□ -1.54
SKN1YGR143W ASI3P53983 676 aa5.41□□□□□ -1.54
SKN1YGR143W GOT1Q03554 138 aa5.41□□□□□ -1.54
SKN1YGR143W IPK1Q06667 281 aa5.41□□□□□ -1.54
SKN1YGR143W RDR1Q08904 546 aa5.41□□□□□ -1.54
SKN1YGR143W GPM2Q12008 311 aa5.41□□□□□ -1.54
SKN1YGR143W PST1Q12355 444 aa5.41□□□□□ -1.54
SKN1YGR143W AHA1Q12449 350 aaKnown RBP5.41□□□□□ -1.54
SKN1YGR143W SLH1P53327 1967 aaKnown RBP5.4□□□□□ -1.54
SKN1YGR143W TY1A-HP0C2I4 478 aaKnown RBP5.4□□□□□ -1.54
SKN1YGR143W MF(ALPHA)2P32435 120 aa5.4□□□□□ -1.54
SKN1YGR143W SNC2P33328 115 aa5.4□□□□□ -1.54
SKN1YGR143W ADD66P36040 267 aa5.4□□□□□ -1.54
SKN1YGR143W CTP1P38152 299 aa5.4□□□□□ -1.54
SKN1YGR143W LSM2P38203 95 aaKnown RBP5.4□□□□□ -1.54
SKN1YGR143W AVT2P39981 480 aa5.4□□□□□ -1.54
SKN1YGR143W YER158CP40095 573 aa5.4□□□□□ -1.54
SKN1YGR143W MOB1P40484 314 aa5.4□□□□□ -1.54
SKN1YGR143W YIR016WP40572 265 aa5.4□□□□□ -1.54
SKN1YGR143W DAD3P69850 94 aa5.4□□□□□ -1.54
SKN1YGR143W SNP1Q00916 300 aaPredicted RBP5.4□□□□□ -1.54
SKN1YGR143W ADH6Q04894 360 aaKnown RBP5.4□□□□□ -1.54
SKN1YGR143W HRD3Q05787 833 aa5.4□□□□□ -1.54
SKN1YGR143W NOC4Q06512 552 aaPredicted RBP5.4□□□□□ -1.54
SKN1YGR143W YDR018CQ12185 396 aa5.4□□□□□ -1.54
SKN1YGR143W YNR034W-AQ3E841 98 aa5.4□□□□□ -1.54
SKN1YGR143W YCR023CP25351 611 aa5.4□□□□□ -1.55
SKN1YGR143W SDH4P37298 181 aa5.4□□□□□ -1.55
SKN1YGR143W YIL152WP40455 235 aa5.4□□□□□ -1.55
SKN1YGR143W VMA21P41806 77 aa5.4□□□□□ -1.55
SKN1YGR143W PNC1P53184 216 aaKnown RBP5.4□□□□□ -1.55
SKN1YGR143W GTR2P53290 341 aa5.4□□□□□ -1.55
SKN1YGR143W ELC1Q03071 99 aa5.4□□□□□ -1.55
SKN1YGR143W PKR1Q03880 122 aaKnown RBP5.4□□□□□ -1.55
SKN1YGR143W COA6Q3E846 104 aa5.4□□□□□ -1.55
SKN1YGR143W SAL1D6W196 494 aa5.39□□□□□ -1.55
SKN1YGR143W HEM13P11353 328 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W MDH1P17505 334 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SKN1YGR143W SRP68P38687 599 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W DBP8P38719 431 aa5.39□□□□□ -1.55
SKN1YGR143W BAT1P38891 393 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W YEL057CP39983 233 aa5.39□□□□□ -1.55
SKN1YGR143W HXT16P47185 567 aa5.39□□□□□ -1.55
SKN1YGR143W ERV29P53337 310 aa5.39□□□□□ -1.55
SKN1YGR143W LSM7P53905 115 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W TIM8P57744 87 aa5.39□□□□□ -1.55
SKN1YGR143W CYT2Q00873 224 aa5.39□□□□□ -1.55
SKN1YGR143W RCR2Q03446 210 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W FRE8Q12209 686 aa5.39□□□□□ -1.55
SKN1YGR143W YGK3Q12222 375 aaPredicted RBP5.39□□□□□ -1.55
SKN1YGR143W PRR2Q12310 699 aa5.39□□□□□ -1.55
SKN1YGR143W YCL012CQ8J0M4 134 aa5.39□□□□□ -1.55
SKN1YGR143W TDH2P00358 332 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W TDH3P00359 332 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SKN1YGR143W CDC33P07260 213 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms