RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS72	YDR485C	YGL082W	P53155	381 aa		4.99	□□□□□ -1.61
VPS72	YDR485C	FAR10	Q06001	478 aa		4.99	□□□□□ -1.61
VPS72	YDR485C	SEC10	Q06245	871 aa		4.99	□□□□□ -1.61
VPS72	YDR485C	MIM1	Q08176	113 aa		4.99	□□□□□ -1.61
VPS72	YDR485C	HNT3	Q08702	217 aa		4.99	□□□□□ -1.61
VPS72	YDR485C	FCY22	Q12119	530 aa		4.99	□□□□□ -1.61
VPS72	YDR485C	SNU23	Q12368	194 aa	Predicted RBP	4.99	□□□□□ -1.61
VPS72	YDR485C	RPS24A	P0CX31	135 aa	Known RBP	4.98	□□□□□ -1.61
VPS72	YDR485C	RPS24B	P0CX32	135 aa	Known RBP	4.98	□□□□□ -1.61
VPS72	YDR485C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
VPS72	YDR485C	CBS2	P14905	389 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	PPH21	P23594	369 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	SPS18	P32572	300 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	CHL4	P38907	458 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	YIL024C	P40543	189 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	MMS2	P53152	137 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	JAC1	P53193	184 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	PEX12	Q04370	399 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	GMC1	Q04399	608 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	OSW1	Q08692	278 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	PCL9	Q12477	304 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	BMH1	P29311	267 aa	Known RBP	4.98	□□□□□ -1.61
VPS72	YDR485C	ECM13	P38195	257 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	PEX22	P39718	180 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	KRE29	P40026	464 aa		4.98	□□□□□ -1.61
VPS72	YDR485C	YHC1	Q05900	231 aa	Known RBP	4.98	□□□□□ -1.61
VPS72	YDR485C	RRS1	Q08746	203 aa	Known RBP	4.98	□□□□□ -1.61
VPS72	YDR485C	YAL064W-B	O13512	126 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	YOL163W	P0CF20	169 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	AEP1	P32493	518 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	GPX1	P36014	167 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	COX14	P39103	70 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	NRK1	P53915	240 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	YMR254C	Q04838	102 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	CTA1	P15202	515 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	ATG15	P25641	520 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	TRR1	P29509	319 aa	Known RBP	4.97	□□□□□ -1.61
VPS72	YDR485C	KTI12	P34253	313 aa	Known RBP	4.97	□□□□□ -1.61
VPS72	YDR485C	YKR041W	P36134	250 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	TAF9	Q05027	157 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	NNT1	Q05874	261 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	YPR091C	Q06833	770 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	HEM25	Q07534	307 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	RFM1	Q12192	310 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	TPO4	Q12256	659 aa		4.97	□□□□□ -1.61
VPS72	YDR485C	PIS1	P06197	220 aa	Known RBP	4.96	□□□□□ -1.62
VPS72	YDR485C	YAP1	P19880	650 aa	Known RBP	4.96	□□□□□ -1.62
VPS72	YDR485C	MIR1	P23641	311 aa	Known RBP	4.96	□□□□□ -1.62
VPS72	YDR485C	MTC4	P38335	694 aa	Known RBP	4.96	□□□□□ -1.62
VPS72	YDR485C	YET3	Q07451	203 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	ATX2	Q12067	313 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	YDR018C	Q12185	396 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	MET2	P08465	486 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	BRR6	P53062	197 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	SEI1	Q06058	285 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	DXO1	Q06349	442 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	YDL114W	Q07530	308 aa		4.96	□□□□□ -1.62
VPS72	YDR485C	LSO2	Q3E772	92 aa	Known RBP	4.96	□□□□□ -1.62
VPS72	YDR485C	YFL068W	P0CX99	160 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	YLL066W-A	P0CY00	160 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	YLL067W-A	P0CY01	160 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	IFM1	P25038	676 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	VPH2	P32341	215 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	MBA1	P38300	278 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	SHG1	P38337	142 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	MCM22	P47167	239 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	PDR17	P53844	350 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	SDC1	Q03323	175 aa		4.95	□□□□□ -1.62
VPS72	YDR485C	HCR1	Q05775	265 aa	Known RBP	4.95	□□□□□ -1.62
VPS72	YDR485C	PHO2	P07269	559 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	POP7	P38291	140 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	WSC4	P38739	605 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	SEO1	P39709	593 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	CPR7	P47103	393 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	YNR066C	P53752	436 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	YPL062W	Q02781	134 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	THP3	Q12049	470 aa	Known RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	AYT1	Q12226	474 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	CRC1	Q12289	327 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	PET20	Q99373	253 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	BI3	Q9ZZW7	517 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	RPS18A	P0CX55	146 aa	Known RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	RPS18B	P0CX56	146 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	GRX2	P17695	143 aa	Known RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	AIM17	P23180	465 aa	Known RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	ALK2	P32789	676 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	ANR2	P36090	516 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	MED8	P38304	223 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	YIL029C	P40538	142 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	SNO3	P43544	222 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	RHO3	Q00245	231 aa	Known RBP	4.94	□□□□□ -1.62
VPS72	YDR485C	MRX4	Q12467	430 aa		4.94	□□□□□ -1.62
VPS72	YDR485C	MDM10	P18409	493 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	DBF2	P22204	572 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	MRPL20	P22354	195 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS72	YDR485C	SRP102	P36057	244 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS72	YDR485C	MRPL3	P36516	390 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	MDM31	P38880	579 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	YGL235W	P53071	178 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	YML018C	Q03730	393 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms