RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	PPT2	Q12036	173 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	SRO7	Q12038	1033 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	VIK1	Q12045	647 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	JLP1	Q12358	412 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	IZH2	Q12442	317 aa		4.72	□□□□□ -1.65
SNF11	YDR073W	FOL3	Q12676	427 aa	Predicted RBP	4.72	□□□□□ -1.65
SNF11	YDR073W	YDR157W	A0A023PZE8	133 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	MRP21	P38175	177 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	YBR062C	P38239	180 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	YIL001W	P40560	513 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	CDD1	Q06549	142 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	IRC25	Q07951	179 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	TIP41	Q12199	356 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	YER078W-A	Q3E7A2	54 aa		4.71	□□□□□ -1.66
SNF11	YDR073W	IKI3	Q06706	1349 aa	Known RBP	4.71	□□□□□ -1.66
SNF11	YDR073W	YBL059W	P34224	193 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	WSC4	P38739	605 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	FRT2	P39734	528 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	SEC72	P39742	193 aa	Known RBP	4.7	□□□□□ -1.66
SNF11	YDR073W	YER186C	P40101	306 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	SER33	P40510	469 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	MIC26	P50087	233 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	NOP19	P53317	196 aa	Predicted RBP	4.7	□□□□□ -1.66
SNF11	YDR073W	SKI8	Q02793	397 aa	Predicted RBP	4.7	□□□□□ -1.66
SNF11	YDR073W	SCS7	Q03529	384 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	ATG17	Q06410	417 aa		4.7	□□□□□ -1.66
SNF11	YDR073W	YMR316C-A	I2HB70	103 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	ADE1	P27616	306 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	SPS19	P32573	292 aa	Known RBP	4.69	□□□□□ -1.66
SNF11	YDR073W	SGE1	P33335	543 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	YPT53	P36019	220 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	MED8	P38304	223 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	TRM5	P38793	499 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	PAN6	P40459	309 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	YJR054W	P47114	497 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	ADO1	P47143	340 aa	Known RBP	4.69	□□□□□ -1.66
SNF11	YDR073W	SDS23	P53172	527 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	SWS2	P53937	143 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	TPS1	Q00764	495 aa	Known RBP	4.69	□□□□□ -1.66
SNF11	YDR073W	CTF19	Q02732	369 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	GIM5	Q04493	163 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	FAR8	Q05040	523 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	HRI1	Q05905	244 aa	Known RBP	4.69	□□□□□ -1.66
SNF11	YDR073W	HEM25	Q07534	307 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	MIM1	Q08176	113 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	GPM2	Q12008	311 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	DCN1	Q12395	269 aa		4.69	□□□□□ -1.66
SNF11	YDR073W	RFA3	P26755	122 aa	Known RBP	4.68	□□□□□ -1.66
SNF11	YDR073W	GPX1	P36014	167 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	IKI1	P38874	309 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	NBP35	P52920	328 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	YGR015C	P53208	328 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	DIA1	P54005	336 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	MRS2	Q01926	470 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	ADD37	Q03233	198 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	PEX10	Q05568	337 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	YLR177W	Q06251	628 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	YOR292C	Q08743	309 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	ERV2	Q12284	196 aa		4.68	□□□□□ -1.66
SNF11	YDR073W	BGL2	P15703	313 aa	Known RBP	4.67	□□□□□ -1.66
SNF11	YDR073W	CAM1	P29547	415 aa	Known RBP	4.67	□□□□□ -1.66
SNF11	YDR073W	AST1	P35183	429 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	SOL2	P37262	315 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	RIP-Chip
SNF11	YDR073W	YBR096W	P38256	230 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	OXA1	P39952	402 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	MGA1	P53050	456 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	NIF3	P53081	288 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	RNH201	P53942	307 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	ELP3	Q02908	557 aa	Known RBP	4.67	□□□□□ -1.66
SNF11	YDR073W	YMR114C	Q04471	368 aa	Known RBP	4.67	□□□□□ -1.66
SNF11	YDR073W	FUS2	Q05670	677 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	MMT2	Q08970	484 aa		4.67	□□□□□ -1.66
SNF11	YDR073W	RPL21B	Q12672	160 aa	Known RBP	4.67	□□□□□ -1.66
SNF11	YDR073W	SIR4	P11978	1358 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	QCR7	P00128	127 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	TPI1	P00942	248 aa	Known RBP	4.66	□□□□□ -1.66
SNF11	YDR073W	PHO2	P07269	559 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	RPL4A	P10664	362 aa	Known RBP	4.66	□□□□□ -1.66
SNF11	YDR073W	AAT2	P23542	418 aa	Known RBP	4.66	□□□□□ -1.66
SNF11	YDR073W	GDH2	P33327	1092 aa	Known RBP	4.66	□□□□□ -1.66
SNF11	YDR073W	PRX1	P34227	261 aa	Known RBP	4.66	□□□□□ -1.66
SNF11	YDR073W	SEN34	P39707	275 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	KRE29	P40026	464 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	STB1	P42845	420 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	RPL4B	P49626	362 aa	Known RBP	4.66	□□□□□ -1.66
SNF11	YDR073W	YPL278C	Q08990	100 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	RFM1	Q12192	310 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	YLR126C	Q12288	251 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	YCL012C	Q8J0M4	134 aa		4.66	□□□□□ -1.66
SNF11	YDR073W	ARO2	P28777	376 aa	Known RBP	4.65	□□□□□ -1.67
SNF11	YDR073W	NTF2	P33331	125 aa	Known RBP	4.65	□□□□□ -1.67
SNF11	YDR073W	VPS51	P36116	164 aa		4.65	□□□□□ -1.67
SNF11	YDR073W	SHE1	P38200	338 aa		4.65	□□□□□ -1.67
SNF11	YDR073W	MBA1	P38300	278 aa		4.65	□□□□□ -1.67
SNF11	YDR073W	GOS1	P38736	223 aa		4.65	□□□□□ -1.67
SNF11	YDR073W	YHR127W	P38833	243 aa	Known RBP	4.65	□□□□□ -1.67
SNF11	YDR073W	TRM9	P49957	279 aa		4.65	□□□□□ -1.67
SNF11	YDR073W	NSA1	P53136	463 aa	Predicted RBP	4.65	□□□□□ -1.67
SNF11	YDR073W	ALG13	P53178	202 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms